Bo9g155940 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g155940 T000970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.807 1.000
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.724 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.724 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.724 0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.704 0.796
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.695 0.796
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.682 0.776
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY

RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g155940.1 AP2 32 83

Links

Other AP2 family TFs
Other Brassica oleracea TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
KLTH0A03498g Lachancea thermotolerans KLTH0A03498g N 0.000
KLTH0A03498g Kluyveromyces thermotolerans KLTH0A03498g N 0.000
KLTH0C10098g Lachancea thermotolerans KLTH0C10098g N 0.000
KLTH0C10098g Kluyveromyces thermotolerans KLTH0C10098g N 0.000
Kwal_18089 Kluyveromyces waltii Kwal_18089 N 0.000
SAKL0A08250g Lachancea kluyveri SAKL0A08250g N 0.000
ZBAI_03676 Zygosaccharomyces bailii ZBAI_03676 N 0.000
ZBAI_09360 Zygosaccharomyces bailii ZBAI_09360 N 0.000
ZYRO0D14080g Zygosaccharomyces rouxii ZYRO0D14080g N 0.000