Bo9g177130 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g177130 T000980_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.714 0.857
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.684 0.796
DREB2A
M06655_2.00
Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN

NNNNDRWGKCGGTKDHDNNNN
Dap-seq
OMalley et al.(2016)
DREB2_col_a
0.680 0.918
DREB2A
M06656_2.00
Arabidopsis thaliana
NHNHMACCGMCWTWD

HWAWGKCGGTKDNDN
Dap-seq
OMalley et al.(2016)
DREB2_colamp_a
0.680 0.918
Q84ND8_HORVU
M09719_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF11_01
0.680 0.878
Q84JE9_HORVU
M09718_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DRF13_01
0.680 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g177130.1 AP2 77 128

Links

Other AP2 family TFs
Other Brassica oleracea TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.732
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.727
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.726
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.726
29729.m002292 Ricinus communis 29729.m002292 I 0.715
PK07402.1 Cannabis sativa PK07402.1 D 0.714
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.712
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.712
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.708
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.707
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.707
Pm018989 Prunus mume Pm018989 I 0.707
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.707
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.703
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.701
MDP0000165880 Malus domestica MDP0000165880 I 0.701
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.701
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.701
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.700
Cla006713 Citrullus lanatus Cla006713 I 0.700
Si002067m.g Setaria italica Si002067m.g I 0.699
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.699
MDP0000147009 Malus domestica MDP0000147009 I 0.699
MDP0000446783 Malus domestica MDP0000446783 I 0.699
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.697
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.697
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.696
DREB2B Arabidopsis thaliana AT3G11020 I 0.696
Cla012194 Citrullus lanatus Cla012194 I 0.695
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.695
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.695
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.695
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.695
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.694
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.693
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.692
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.692
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.692
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.692
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.692
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.692
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.692
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.692
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.692
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.691
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.691
OB01G13930 Oryza brachyantha OB01G13930 I 0.691
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.691
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.691
OBART01G04210 Oryza barthii OBART01G04210 I 0.691
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.691
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.691
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.691
DREB2A Oryza sativa OS01G0165000 I 0.691
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.691
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.691
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.690
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.690
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.687
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.687
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.687
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.687
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.686
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.686
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.686
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.685
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.684
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.684
OBART05G12580 Oryza barthii OBART05G12580 I 0.684
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.684
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.684
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.684
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.684
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.684
F775_05774 Aegilops tauschii F775_05774 I 0.684
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.684
OB05G20700 Oryza brachyantha OB05G20700 I 0.684
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.683
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.682
F775_32062 Aegilops tauschii F775_32062 I 0.682
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.682
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.682
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.682
PK07829.1 Cannabis sativa PK07829.1 I 0.682
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.682
Bo4g190040 Brassica oleracea Bo4g190040 I 0.681
Bra017011 Brassica rapa Bra017011 I 0.681
DREB2A Arabidopsis thaliana AT5G05410 D 0.680
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.680
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.680
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.680
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.680
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.680
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.678
Bo1g141310 Brassica oleracea Bo1g141310 I 0.678
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.677