Bra007341 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra007341 T001029_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.797 0.960
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.758 0.900
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.679 0.800
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.679 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra007341.1-P AP2 26 77

Links

Other AP2 family TFs
Other Brassica rapa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g092010 Brassica oleracea Bo8g092010 I 0.819
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.810
Bo6g073020 Brassica oleracea Bo6g073020 I 0.802
Bo4g111040 Brassica oleracea Bo4g111040 I 0.801
Bra014617 Brassica rapa Bra014617 I 0.801
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.797
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.797
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.797
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.797
DREB2F Arabidopsis thaliana AT3G57600 D 0.797
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.773
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.773
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.773
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.771
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.771
TCM_024756 Theobroma cacao TCM_024756 I 0.771
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.770
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.770
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.770
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.768
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.768
Ca_07264 Cicer arietinum Ca_07264 I 0.768
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.768
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.768
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.768
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.768
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.768
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.768
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.768
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.768
27810.m000639 Ricinus communis 27810.m000639 I 0.768
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.765
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.765
DREB2E Oryza sativa OS03G0174400 I 0.764
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.764
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.764
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.764
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.764
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.764
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.764
OBART03G05550 Oryza barthii OBART03G05550 I 0.764
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.764
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.764
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.764
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.764
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.764
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.764
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.764
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.764
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.763
MDP0000703626 Malus domestica MDP0000703626 I 0.762
Pm025865 Prunus mume Pm025865 I 0.762
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.762
MDP0000871361 Malus domestica MDP0000871361 I 0.762
PK08602.1 Cannabis sativa PK08602.1 D 0.758
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.758
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.758
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.757
Cla017778 Citrullus lanatus Cla017778 I 0.755
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.755
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.755
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.754
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.754
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.746
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.735
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.724
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.717
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.690
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.686
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.684
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.684
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.681
Pm003634 Prunus mume Pm003634 I 0.680
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.679
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.679
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.679
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.679
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.679
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.679
abi4 Zea mays GRMZM2G093595 D 0.679
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.679
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.679
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.679
ABI4 Oryza sativa OS05G0351200 I 0.679
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.679
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.679
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.678
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.677