Bra010461 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra010461 T001055_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8W242_BRANA
M09747_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF_01
0.802 1.000
Q8S2T2_BRANA
M09744_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF17_01
0.802 1.000
A6N8P3_BRANA
M09738_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBI5_01
0.802 1.000
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.707 0.900
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.707 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010461.1-P AP2 48 99

Links

Other AP2 family TFs
Other Brassica rapa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Q8S2T2_BRANA Brassica napus Q8S2T2_BRANA D 0.802
A6N8P3_BRANA Brassica napus A6N8P3_BRANA D 0.802
Bo8g050740 Brassica oleracea Bo8g050740 I 0.802
Q8W242_BRANA Brassica napus Q8W242_BRANA D 0.802
Bo8g050800 Brassica oleracea Bo8g050800 I 0.769
Bra010460 Brassica rapa Bra010460 I 0.769
Bra022770 Brassica rapa Bra022770 I 0.710
Bra019162 Brassica rapa Bra019162 I 0.707
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.707
Bo7g110320 Brassica oleracea Bo7g110320 I 0.707
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.707
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.677