Bra016518 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra016518 T001100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.809 0.960
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.809 0.960
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.788 0.900
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.788 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016518.1-P AP2 8 59

Links

Other AP2 family TFs
Other Brassica rapa TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003640 Calypte anna Aan_R003640 I 0.000
Aan_R014715 Calypte anna Aan_R014715 I 0.000
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.000
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.000
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.000
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.000
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.000
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.000
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.000
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.000
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.000
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I 0.000
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.000
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.000
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.000
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.000
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.000
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.000
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.000
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.000
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.000
GLI1 Bos taurus ENSBTAG00000006631 I 0.000
GLI3 Bos taurus ENSBTAG00000010671 I 0.000
GLI2 Bos taurus ENSBTAG00000011682 I 0.000
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I 0.000
GLI1 Canis familiaris ENSCAFG00000000223 I 0.000
GLI3 Canis familiaris ENSCAFG00000003535 I 0.000
GLI2 Canis familiaris ENSCAFG00000004821 I 0.000
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.000
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I 0.000
GLI1 Callithrix jacchus ENSCJAG00000007324 I 0.000
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.000
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.000
GLI1 Cavia porcellus ENSCPOG00000005414 I 0.000
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.000
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I 0.000
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.000
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.000
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I 0.000
gli2b Danio rerio ENSDARG00000020884 I 0.000
gli3 Danio rerio ENSDARG00000052131 I 0.000
gli1 Danio rerio ENSDARG00000101244 I 0.000
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.000
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I 0.000
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.000
Gli1 Dipodomys ordii ENSDORG00000007124 I 0.000
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.000
GLI3 Equus caballus ENSECAG00000009281 I 0.000
GLI1 Equus caballus ENSECAG00000011246 I 0.000
GLI3 Echinops telfairi ENSETEG00000003955 I 0.000
GLI1 Echinops telfairi ENSETEG00000006674 I 0.000
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.000
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.000
GLI3 Felis catus ENSFCAG00000011989 I 0.000
GLI2 Felis catus ENSFCAG00000014531 I 0.000
GLI2 Homo sapiens ENSG00000074047 D 0.000
GLI3 Homo sapiens ENSG00000106571 D 0.000
GLI1 Homo sapiens ENSG00000111087 D 0.000
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I 0.000
GLI2 Gallus gallus ENSGALG00000011630 I 0.000
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.000
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.000
GLI1 Gorilla gorilla ENSGGOG00000001974 I 0.000
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.000
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.000
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.000
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.000
GLI1 Loxodonta africana ENSLAFG00000022910 I 0.000
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.000
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I 0.000
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I 0.000
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.000
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.000
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.000
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.000
GLI3 Microcebus murinus ENSMICG00000010785 I 0.000
GLI1 Myotis lucifugus ENSMLUG00000001013 I 0.000
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.000
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.000
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.000
GLI1 Macaca mulatta ENSMMUG00000022058 I 0.000
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.000
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.000
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.000
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.000
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I 0.000
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.000
Gli1 Mus musculus ENSMUSG00000025407 D 0.000
Gli2 Mus musculus ENSMUSG00000048402 D 0.000
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.000
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.000
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I 0.000
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.000
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I 0.000
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.000
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.000
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.000
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.000
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I 0.000
GLI1 Otolemur garnettii ENSOGAG00000005219 I 0.000
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.000
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.000
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I 0.000
GLI1 Ochotona princeps ENSOPRG00000006483 I 0.000
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.000
gli2b Oryzias latipes ENSORLG00000012490 I 0.000
ENSP00000228682 Macaca fascicularis ENSP00000228682 I 0.000
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.000
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.000
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.000
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I 0.000
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.000
GLI2 Procavia capensis ENSPCAG00000001704 I 0.000
GLI3 Procavia capensis ENSPCAG00000015092 I 0.000
GLI1 Procavia capensis ENSPCAG00000015756 I 0.000
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.000
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I 0.000
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I 0.000
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.000
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.000
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.000
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.000
GLI1 Pan troglodytes ENSPTRG00000005133 I 0.000
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.000
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.000
GLI1 Pteropus vampyrus ENSPVAG00000012109 I 0.000
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.000
Gli2 Rattus norvegicus ENSRNOG00000007261 I 0.000
Gli1 Rattus norvegicus ENSRNOG00000025120 I 0.000
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.000
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I 0.000
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.000
GLI2 Sus scrofa ENSSSCG00000015733 I 0.000
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.000
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I 0.000
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.000
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.000
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I 0.000
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I 0.000
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.000
gli2b Takifugu rubripes ENSTRUG00000007692 I 0.000
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.000
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.000
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.000
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.000
GLI1 Tursiops truncatus ENSTTRG00000013086 I 0.000
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I 0.000
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.000
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.000
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.000
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.000
HelroG111329 Helobdella robusta HelroG111329 I 0.000
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I 0.000
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.000
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.000
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.000
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.000
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.000
Tal_R006208 Tyto alba Tal_R006208 I 0.000
Tal_R009020 Tyto alba Tal_R009020 I 0.000
gli3.L Xenopus laevis XB-GENE-865509 I 0.000
XP_002933449 Xenopus tropicalis XP_002933449 I 0.000
XP_002933450 Xenopus tropicalis XP_002933450 I 0.000