Bra017011 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra017011 T001104_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.734 0.875
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.677 0.792
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017011.1-P AP2 136 186

Links

Other AP2 family TFs
Other Brassica rapa TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo4g190040 Brassica oleracea Bo4g190040 I 0.807
29729.m002292 Ricinus communis 29729.m002292 I 0.759
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.754
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.752
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.752
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.750
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.742
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.737
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.737
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.734
PK07402.1 Cannabis sativa PK07402.1 D 0.734
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.734
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.733
Cla006713 Citrullus lanatus Cla006713 I 0.731
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.731
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.731
TCM_043275 Theobroma cacao TCM_043275 I 0.727
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.723
MDP0000290585 Malus domestica MDP0000290585 I 0.723
Pm015262 Prunus mume Pm015262 I 0.723
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.722
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.722
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.720
MDP0000165880 Malus domestica MDP0000165880 I 0.719
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.718
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.718
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.716
MDP0000446783 Malus domestica MDP0000446783 I 0.716
Pm018989 Prunus mume Pm018989 I 0.716
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.716
MDP0000147009 Malus domestica MDP0000147009 I 0.716
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.714
TCM_043302 Theobroma cacao TCM_043302 I 0.712
TCM_043306 Theobroma cacao TCM_043306 I 0.712
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.711
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.711
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.708
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.707
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.707
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.706
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.703
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.703
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.697
Si002067m.g Setaria italica Si002067m.g I 0.694
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.694
Pm003634 Prunus mume Pm003634 I 0.692
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.691
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.691
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.691
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.691
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.689
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.688
Cla001755 Citrullus lanatus Cla001755 I 0.688
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.688
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.688
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.687
MDP0000153866 Malus domestica MDP0000153866 I 0.687
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.686
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.685
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.685
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.684
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.684
OBART01G04210 Oryza barthii OBART01G04210 I 0.684
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.684
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.684
DREB2A Oryza sativa OS01G0165000 I 0.684
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.684
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.684
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.684
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.684
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.684
OB01G13930 Oryza brachyantha OB01G13930 I 0.684
PK07829.1 Cannabis sativa PK07829.1 I 0.682
Bo9g177130 Brassica oleracea Bo9g177130 I 0.681
Cla012194 Citrullus lanatus Cla012194 I 0.681
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.679
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.677
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.677
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.677
F775_05774 Aegilops tauschii F775_05774 I 0.677
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.677
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.677
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.677