CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra017011
(
Brassica rapa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bra017011
T001104_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.734
0.875
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.677
0.792
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra017011.1-P
AP2
136
186
NYRGVRQRTWGKWVAEIRQPCRGARLWLGTFPSSYEAALAYDEAAKAMYGE
Links
Other
AP2
family TFs
Other
Brassica rapa
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy