Bra022573 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra022573 T001141_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN

NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
0.734 0.959
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN

NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
0.734 0.959
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022573.1-P AP2 68 118

Links

Other AP2 family TFs
Other Brassica rapa TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGACG00000016307 Gasterosteus aculeatus ENSGACG00000016307 N 0.000
ENSPFOG00000014951 Poecilia formosa ENSPFOG00000014951 N 0.000
ENSXMAG00000017495 Xiphophorus maculatus ENSXMAG00000017495 N 0.000