BRADI1G23756 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G23756 T001261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.722 0.902
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.722 0.902
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G23756.1 AP2 55 106

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.802
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.802
OBART07G19610 Oryza barthii OBART07G19610 I 0.802
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.802
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.802
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.802
OS07G0575000 Oryza sativa OS07G0575000 I 0.802
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.802
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.802
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.802
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.802
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.801
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.800
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.798
Si030686m.g Setaria italica Si030686m.g I 0.798
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.798
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.780
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.775
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.728
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.726
Si033237m.g Setaria italica Si033237m.g I 0.726
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.726
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.725
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.724
OB07G15030 Oryza brachyantha OB07G15030 I 0.723
OS07G0204000 Oryza sativa OS07G0204000 I 0.723
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.723
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.723
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.723
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.723
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.723
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.723
OBART07G06690 Oryza barthii OBART07G06690 I 0.723
TCM_040015 Theobroma cacao TCM_040015 I 0.723
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.723
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.723
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.722
Bra020063 Brassica rapa Bra020063 I 0.722
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.722
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.722
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.722
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.722
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.722
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.722
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.722
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.722
Bra002262 Brassica rapa Bra002262 I 0.722
Bra006518 Brassica rapa Bra006518 I 0.722
Bo9g152440 Brassica oleracea Bo9g152440 I 0.722
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.722
30084.m000185 Ricinus communis 30084.m000185 I 0.722
Bo2g018360 Brassica oleracea Bo2g018360 I 0.722
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.722
Pm025326 Prunus mume Pm025326 I 0.722
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.722
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.722
MDP0000177547 Malus domestica MDP0000177547 I 0.722
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.722
Ca_08232 Cicer arietinum Ca_08232 I 0.722
Bo3g013830 Brassica oleracea Bo3g013830 I 0.722
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.722
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.722
TCM_025913 Theobroma cacao TCM_025913 I 0.722
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.722
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.720
mgf022665m Mimulus guttatus mgf022665m I 0.719
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.719
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.719
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.718
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.718
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.718
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.715
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.714
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.713
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.712
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.712
Pm000004 Prunus mume Pm000004 I 0.711
MDP0000525933 Malus domestica MDP0000525933 I 0.711
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.711
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.710
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.710
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.710
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.710
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.710
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.708
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.708
Cla012318 Citrullus lanatus Cla012318 I 0.708
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.702
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.702
PK25269.1 Cannabis sativa PK25269.1 I 0.698
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.697
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.696
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.695
TCM_011632 Theobroma cacao TCM_011632 I 0.695
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.693
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.693
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.693
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.693
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.693
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.693
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.693
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.693
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.693
OS12G0582900 Oryza sativa OS12G0582900 I 0.693
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.693
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.693
MDP0000276536 Malus domestica MDP0000276536 I 0.693
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.693
OBART12G17080 Oryza barthii OBART12G17080 I 0.693
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.693
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.693
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.693
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.693
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.693
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.693
MDP0000551969 Malus domestica MDP0000551969 I 0.693
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.693
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.693
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.693
Ca_10494 Cicer arietinum Ca_10494 I 0.693
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.693
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.693
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.693
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.693
F775_02727 Aegilops tauschii F775_02727 I 0.693
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.693
TCM_018659 Theobroma cacao TCM_018659 I 0.693
PK13330.1 Cannabis sativa PK13330.1 I 0.693
Si038848m.g Setaria italica Si038848m.g I 0.693
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.693
29635.m000461 Ricinus communis 29635.m000461 I 0.693
Pm015931 Prunus mume Pm015931 I 0.693
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.693
30174.m009031 Ricinus communis 30174.m009031 I 0.692
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.691
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.691
29813.m001543 Ricinus communis 29813.m001543 I 0.691
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.691
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.690
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.690
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.690
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.690
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.690
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.690
Si024417m.g Setaria italica Si024417m.g I 0.690
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.690
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.690
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.690
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.690
Cla010474 Citrullus lanatus Cla010474 I 0.690
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.690
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.689
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.689
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.688
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.688
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.686
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.686
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.686
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.686
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.685
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.685
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.685
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.685
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.685
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.685
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.684
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.683
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.682
MDP0000133476 Malus domestica MDP0000133476 I 0.682
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.682
Ca_00417 Cicer arietinum Ca_00417 I 0.682
TCM_005425 Theobroma cacao TCM_005425 I 0.682
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.682
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.682
Pm008788 Prunus mume Pm008788 I 0.682
mgf018851m Mimulus guttatus mgf018851m I 0.682
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.682
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.682
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.682
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.682
MDP0000138669 Malus domestica MDP0000138669 I 0.682
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.682
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.681
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.681
Si032213m.g Setaria italica Si032213m.g I 0.681
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.681
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.680
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.679
30174.m008961 Ricinus communis 30174.m008961 I 0.678
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.677