BRADI1G30337 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G30337 T001262_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.814 0.837
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.805 0.908
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.792 0.806
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.791 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G30337.1 AP2 104 153
BRADI1G30337.1 AP2 196 247

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.865
MDP0000137561 Malus domestica MDP0000137561 I 0.837
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.837
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.837
Pm030172 Prunus mume Pm030172 I 0.837
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.837
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.836
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.836
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.836
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.836
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.836
OB06G29960 Oryza brachyantha OB06G29960 I 0.836
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.835
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.834
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.830
Ca_12010 Cicer arietinum Ca_12010 I 0.830
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.829
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.827
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.814
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.814
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.814
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.814
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.814
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.814
mgf009315m Mimulus guttatus mgf009315m I 0.814
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.814
Cla000716 Citrullus lanatus Cla000716 I 0.814
29805.m001494 Ricinus communis 29805.m001494 I 0.814
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.814
Ca_09295 Cicer arietinum Ca_09295 I 0.814
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.814
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.814
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.814
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.814
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.814
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.814
Bo7g118400 Brassica oleracea Bo7g118400 I 0.814
Bra011741 Brassica rapa Bra011741 I 0.814
Bra017809 Brassica rapa Bra017809 I 0.814
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.814
Bo1g004960 Brassica oleracea Bo1g004960 I 0.814
AP2 Arabidopsis thaliana AT4G36920 I 0.814
PK02403.1 Cannabis sativa PK02403.1 I 0.814
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.814
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.814
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.814
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.814
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.814
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.814
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.814
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.814
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.813
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.813
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.813
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.811
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.811
Pm000974 Prunus mume Pm000974 I 0.811
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.811
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.811
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.811
TCM_000665 Theobroma cacao TCM_000665 I 0.811
MDP0000181606 Malus domestica MDP0000181606 I 0.811
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.810
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.810
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.810
Cla018124 Citrullus lanatus Cla018124 I 0.809
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.809
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.809
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.809
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.808
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.808
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.808
Si012635m.g Setaria italica Si012635m.g I 0.808
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.808
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.808
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.808
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.808
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.808
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.808
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.808
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.807
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.807
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.807
MDP0000200319 Malus domestica MDP0000200319 I 0.807
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.807
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.807
28752.m000339 Ricinus communis 28752.m000339 I 0.807
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.807
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.807
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.807
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.807
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.807
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.807
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.807
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.807
TCM_022077 Theobroma cacao TCM_022077 I 0.807
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.807
Pm002492 Prunus mume Pm002492 I 0.807
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.807
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.807
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.807
Ca_02499 Cicer arietinum Ca_02499 I 0.807
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.807
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.807
Si025305m.g Setaria italica Si025305m.g I 0.807
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.807
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.807
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.807
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.807
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.807
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.807
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.807
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.807
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.807
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.807
OS05G0121600 Oryza sativa OS05G0121600 I 0.807
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.806
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.805
mgf021945m Mimulus guttatus mgf021945m I 0.805
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.805
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.805
TCM_042000 Theobroma cacao TCM_042000 I 0.805
F775_32962 Aegilops tauschii F775_32962 I 0.805
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.805
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.805
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.805
P93632_MAIZE Zea mays P93632_MAIZE D 0.805
PK07183.1 Cannabis sativa PK07183.1 I 0.805
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.805
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.805
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.804
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.804
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.804
29169.m000017 Ricinus communis 29169.m000017 I 0.804
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.803
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.803
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.803
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.800
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.798
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.797
OB03G45870 Oryza brachyantha OB03G45870 I 0.797
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.795
Bra011939 Brassica rapa Bra011939 I 0.795
Ca_14618 Cicer arietinum Ca_14618 I 0.795
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.795
Bo4g070350 Brassica oleracea Bo4g070350 I 0.795
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.793
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.792
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.792
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.792
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.792
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.792
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.792
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.792
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.792
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.792
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.792
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.791
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.790
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.790
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.789
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.789
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.789
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.788
Si036068m.g Setaria italica Si036068m.g I 0.788
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.788
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.788
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.788
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.788
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.788
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.788
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.788
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.787
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.786
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.785
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.785
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.785
OS07G0235800 Oryza sativa OS07G0235800 I 0.784
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.784
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.784
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.784
OBART07G08110 Oryza barthii OBART07G08110 I 0.784
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.784
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.784
Si029636m.g Setaria italica Si029636m.g I 0.784
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.784
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.784
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.784
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.784
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.784
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.784
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.784
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.784
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.783
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.783
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.783
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.782
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.782
MDP0000163645 Malus domestica MDP0000163645 I 0.782
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.782
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.780
mgf005133m Mimulus guttatus mgf005133m I 0.779
mgf010466m Mimulus guttatus mgf010466m I 0.779
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.779
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.778
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.777
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.777
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.775
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.774
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.768
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.767
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.765
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.764
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.764
Bo7g064000 Brassica oleracea Bo7g064000 I 0.764
TOE3 Arabidopsis thaliana AT5G67180 I 0.764
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.764
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.764
Bra012139 Brassica rapa Bra012139 I 0.764
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.763
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.762
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.761
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.761
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.760
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.759
OS03G0818800 Oryza sativa OS03G0818800 I 0.757
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.755
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.752
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.750
Cla020549 Citrullus lanatus Cla020549 I 0.748
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.748
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.743
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.743
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.729
Cla018549 Citrullus lanatus Cla018549 I 0.724
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.720
Si006371m.g Setaria italica Si006371m.g I 0.697
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.682