BRADI1G33550 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G33550 T001264_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.742 0.840
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.742 0.840
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.742 0.840
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.679 0.820
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.679 0.820
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.679 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G33550.1 AP2 19 70

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF4 Arabidopsis thaliana AT3G15210 D 0.679
ERF7 Arabidopsis thaliana AT3G20310 D 0.742
Bo1g108970 Brassica oleracea Bo1g108970 I 0.679
Bo3g074840 Brassica oleracea Bo3g074840 I 0.701
Bo5g109800 Brassica oleracea Bo5g109800 I 0.685
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.703
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.686
Bra001784 Brassica rapa Bra001784 I 0.701
Bra018864 Brassica rapa Bra018864 I 0.733
Bra035792 Brassica rapa Bra035792 I 0.685
Bra038261 Brassica rapa Bra038261 I 0.679
BRADI3G04410 Brachypodium distachyon BRADI3G04410 I 0.762
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.725
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.712
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.712
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.716
Ca_20544 Cicer arietinum Ca_20544 I 0.699
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.677
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.696
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.704
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.729
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.717
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.684
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.717
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.746
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.684
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.739
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.699
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.680
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.726
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.725
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.679
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.694
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.680
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.685
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.724
LPERR06G21240 Leersia perrieri LPERR06G21240 N 0.715
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.677
OBART06G25530 Oryza barthii OBART06G25530 N 0.702
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.685
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.715
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N 0.702
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.715
OMERI06G25700 Oryza meridionalis OMERI06G25700 N 0.702
ONIVA02G04420 Oryza nivara ONIVA02G04420 N 0.685
ONIVA06G28540 Oryza nivara ONIVA06G28540 N 0.702
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.724
OPUNC06G23160 Oryza punctata OPUNC06G23160 N 0.702
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.685
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.715
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.715
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N 0.702
OS06G0691100 Oryza sativa OS06G0691100 N 0.702
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.725
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.725
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N 0.694
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.721
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.725
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.683
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.679
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.677
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.677
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.712
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.746