BRADI1G72890 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI1G72890 T001284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.880 0.865
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.880 0.865
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.873 0.865
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.873 0.865
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.858 0.846
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.858 0.846
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.817 0.827
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.817 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G72890.1 AP2 252 309
BRADI1G72890.1 AP2 351 403

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

527 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
e_gw1.00083.293.1 Aspergillus carbonarius e_gw1.00083.293.1 N 0.000
ACLA_084770 Aspergillus clavatus CADACLAG00008193 N 0.000
CADAFLAG00004656 Aspergillus flavus CADAFLAG00004656 N 0.000
AFUA_6G11110 Aspergillus fumigatus CADAFUAG00001734 N 0.000
ANIA_00585 Aspergillus nidulans CADANIAG00002091 N 0.000
CADANGAG00007095 Aspergillus niger CADANGAG00007095 N 0.000
CADAORAG00007625 Aspergillus oryzae CADAORAG00007625 N 0.000
A1O9_10787 Exophiala aquamarina A1O9_10787 N 0.000
MPH_03433 Macrophomina phaseolina MPH_03433 N 0.000
PDIP_39480 Penicillium digitatum PDIP_39480 N 0.000
PEX1_024560 Penicillium expansum PEX1_024560 N 0.000
PDE_07989 Penicillium oxalicum PDE_07989 N 0.000
PCH_Pc21g21680 Penicillium rubens PCH_Pc21g21680 N 0.000
PTT_20303 Pyrenophora teres PTT_20303 N 0.000