BRADI2G04000 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI2G04000 T001289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.777 0.939
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.737 0.878
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.796
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.684 0.816
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.678 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G04000.1 AP2 76 127

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.794
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.788
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.786
OBART01G04210 Oryza barthii OBART01G04210 I 0.786
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.786
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.786
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.786
OB01G13930 Oryza brachyantha OB01G13930 I 0.786
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.786
DREB2A Oryza sativa OS01G0165000 I 0.786
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.786
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.786
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.786
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.780
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.777
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.777
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.777
F775_05774 Aegilops tauschii F775_05774 I 0.777
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.777
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.777
Si002067m.g Setaria italica Si002067m.g I 0.773
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.770
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.767
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.749
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.740
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.740
PK07402.1 Cannabis sativa PK07402.1 D 0.737
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.736
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.733
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.731
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.731
Cla006713 Citrullus lanatus Cla006713 I 0.730
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.730
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.729
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.729
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.729
29729.m002292 Ricinus communis 29729.m002292 I 0.723
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.722
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.722
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.722
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.720
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.718
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.717
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.717
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.715
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.715
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.714
MDP0000153866 Malus domestica MDP0000153866 I 0.712
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.707
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.707
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.707
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.707
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.706
Pm015262 Prunus mume Pm015262 I 0.706
MDP0000290585 Malus domestica MDP0000290585 I 0.705
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.705
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.704
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.704
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.702
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.701
MDP0000165880 Malus domestica MDP0000165880 I 0.698
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.697
TCM_043306 Theobroma cacao TCM_043306 I 0.696
TCM_043302 Theobroma cacao TCM_043302 I 0.696
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.695
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.695
MDP0000446783 Malus domestica MDP0000446783 I 0.694
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.694
TCM_043275 Theobroma cacao TCM_043275 I 0.694
MDP0000147009 Malus domestica MDP0000147009 I 0.694
Pm018989 Prunus mume Pm018989 I 0.693
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.693
F775_32062 Aegilops tauschii F775_32062 I 0.693
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.693
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.693
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.693
MDP0000880312 Malus domestica MDP0000880312 I 0.692
PK07829.1 Cannabis sativa PK07829.1 I 0.692
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.692
mgf017629m Mimulus guttatus mgf017629m I 0.690
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.689
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.689
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.688
Bo9g177130 Brassica oleracea Bo9g177130 I 0.687
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.687
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.687
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.687
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.687
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.687
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.686
Bo9g155940 Brassica oleracea Bo9g155940 I 0.686
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.686
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.686
Bra002159 Brassica rapa Bra002159 I 0.686
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.686
DREB2G Arabidopsis thaliana AT5G18450 D 0.686
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.686
Bo4g190040 Brassica oleracea Bo4g190040 I 0.684
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.684
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.684
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.684
Bra017011 Brassica rapa Bra017011 I 0.684
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.683
Pm003634 Prunus mume Pm003634 I 0.682
Si022619m.g Setaria italica Si022619m.g I 0.681
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.680
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.680
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.680
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.680
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.680
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.678
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.678
27810.m000639 Ricinus communis 27810.m000639 I 0.678
Ca_12446 Cicer arietinum Ca_12446 I 0.678
Ca_07264 Cicer arietinum Ca_07264 I 0.678
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.678
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.678
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.678
PK08602.1 Cannabis sativa PK08602.1 D 0.678
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.678
TCM_024756 Theobroma cacao TCM_024756 I 0.678
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.678
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.678
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.678
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.678
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.678
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.678
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.678
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.677
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.677
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.677