BRADI3G12565 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G12565 T001321_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.708 0.808
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.679 0.788
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G12565.1 AP2 11 63

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_23071 Aegilops tauschii F775_23071 I 0.719
F775_33015 Aegilops tauschii F775_33015 I 0.806
F775_03520 Aegilops tauschii F775_03520 I 0.697
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.683
AMTR_s00009p00148470 Amborella trichopoda AMTR_s00009p00148470 I 0.679
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.682
Aquca_034_00377 Aquilegia coerulea Aquca_034_00377 N 0.715
Aquca_067_00006 Aquilegia coerulea Aquca_067_00006 I 0.693
ATERF14 Arabidopsis lyrata scaffold_100393.1 I 0.680
scaffold_800707.1 Arabidopsis lyrata scaffold_800707.1 I 0.708
ERF096 Arabidopsis thaliana AT5G43410 D 0.708
ERF14 Arabidopsis thaliana AT1G04370 D 0.679
Bostr.3148s0125 Boechera stricta Bostr.3148s0125 I 0.708
Bostr.26675s0318 Boechera stricta Bostr.26675s0318 I 0.684
Bo9g059180 Brassica oleracea Bo9g059180 I 0.708
Bo5g004520 Brassica oleracea Bo5g004520 I 0.679
Bra027493 Brassica rapa Bra027493 I 0.708
Bra015310 Brassica rapa Bra015310 I 0.679
Cagra.0244s0009 Capsella grandiflora Cagra.0244s0009 I 0.708
Cagra.1671s0052 Capsella grandiflora Cagra.1671s0052 I 0.684
Carubv10011057m.g Capsella rubella Carubv10011057m.g I 0.684
Carubv10028227m.g Capsella rubella Carubv10028227m.g I 0.695
Ca_12218 Cicer arietinum Ca_12218 I 0.677
Cla015064 Citrullus lanatus Cla015064 I 0.703
Cla021852 Citrullus lanatus Cla021852 I 0.727
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I 0.688
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.697
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.697
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I 0.688
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.727
Cucsa.383680 Cucumis sativus Cucsa.383680 I 0.682
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.702
Eucgr.H03091 Eucalyptus grandis Eucgr.H03091 I 0.700
Eucgr.B01537 Eucalyptus grandis Eucgr.B01537 I 0.678
Thhalv10003355m.g Eutrema salsugineum Thhalv10003355m.g I 0.709
Thhalv10009418m.g Eutrema salsugineum Thhalv10009418m.g I 0.683
gene08071-v1.0-hybrid Fragaria vesca gene08071-v1.0-hybrid I 0.684
GLYMA02G00890 Glycine max GLYMA02G00890 I 0.703
GLYMA10G33080 Glycine max GLYMA10G33080 I 0.691
GLYMA20G34550 Glycine max GLYMA20G34550 I 0.686
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.684
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I 0.691
LPERR08G20550 Leersia perrieri LPERR08G20550 I 0.806
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.679
LPERR09G16370 Leersia perrieri LPERR09G16370 I 0.723
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.677
Lus10011831.g Linum usitatissimum Lus10011831.g I 0.679
LjSGA_028626.1 Lotus japonicus LjSGA_028626.1 I 0.692
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.679
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.715
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I 0.684
cassava38508.m1 Manihot esculenta cassava38508.m1 I 0.706
cassava3323.m1 Manihot esculenta cassava3323.m1 I 0.688
mgf018935m Mimulus guttatus mgf018935m I 0.685
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.681
OBART04G05450 Oryza barthii OBART04G05450 I 0.680
OBART10G11630 Oryza barthii OBART10G11630 I 0.683
OBART09G20380 Oryza barthii OBART09G20380 I 0.723
OBART08G23880 Oryza barthii OBART08G23880 I 0.806
OB08G30700 Oryza brachyantha OB08G30700 I 0.806
OB09G27120 Oryza brachyantha OB09G27120 I 0.722
OB04G14270 Oryza brachyantha OB04G14270 I 0.680
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.680
ORGLA08G0192600 Oryza glaberrima ORGLA08G0192600 I 0.806
ORGLA09G0166700 Oryza glaberrima ORGLA09G0166700 I 0.723
ORGLA10G0102500 Oryza glaberrima ORGLA10G0102500 I 0.683
OGLUM10G11380 Oryza glumaepatula OGLUM10G11380 I 0.683
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.680
OGLUM09G21140 Oryza glumaepatula OGLUM09G21140 I 0.723
OGLUM08G25360 Oryza glumaepatula OGLUM08G25360 I 0.806
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.680
BGIOSGA031822 Oryza indica BGIOSGA031822 I 0.683
BGIOSGA029230 Oryza indica BGIOSGA029230 I 0.723
BGIOSGA029206 Oryza indica BGIOSGA029206 I 0.806
BGIOSGA029205 Oryza indica BGIOSGA029205 I 0.806
OLONG_005596 Oryza longistaminata OLONG_005596 I 0.723
OLONG_010226 Oryza longistaminata OLONG_010226 I 0.806
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.680
OMERI08G18690 Oryza meridionalis OMERI08G18690 I 0.806
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.680
ONIVA01G39370 Oryza nivara ONIVA01G39370 I 0.723
ONIVA10G10810 Oryza nivara ONIVA10G10810 I 0.683
ONIVA09G01310 Oryza nivara ONIVA09G01310 I 0.806
OPUNC09G18680 Oryza punctata OPUNC09G18680 I 0.723
OPUNC10G09910 Oryza punctata OPUNC10G09910 I 0.683
OPUNC08G21790 Oryza punctata OPUNC08G21790 I 0.806
ORUFI08G26360 Oryza rufipogon ORUFI08G26360 I 0.806
ORUFI10G12140 Oryza rufipogon ORUFI10G12140 I 0.683
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.680
ORUFI09G22030 Oryza rufipogon ORUFI09G22030 I 0.723
OS09G0571700 Oryza sativa OS09G0571700 I 0.723
OS04G0257500 Oryza sativa OS04G0257500 I 0.680
Pavir.Fa00010 Panicum virgatum Pavir.Fa00010 I 0.806
Pavir.Bb01308 Panicum virgatum Pavir.Bb01308 I 0.725
Pavir.Fb02184 Panicum virgatum Pavir.Fb02184 I 0.806
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.678
POPTR_0008s16600 Populus trichocarpa POPTR_0008s16600 I 0.688
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.697
29584.m000237 Ricinus communis 29584.m000237 I 0.697
29603.m000510 Ricinus communis 29603.m000510 I 0.706
SapurV1A.0006s0870 Salix purpurea SapurV1A.0006s0870 I 0.681
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I 0.684
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.702
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.678
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.702
Si032391m.g Setaria italica Si032391m.g I 0.725
Si040039m.g Setaria italica Si040039m.g I 0.793
Si015487m.g Setaria italica Si015487m.g I 0.806
Si011941m.g Setaria italica Si011941m.g I 0.803
Solyc11g006050.1 Solanum lycopersicum Solyc11g006050.1 I 0.693
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I 0.684
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I 0.708
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I 0.708
PGSC0003DMG400045092 Solanum tuberosum PGSC0003DMG400045092 I 0.691
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I 0.684
Sb07g023803 Sorghum bicolor Sb07g023803 I 0.806
TCM_020869 Theobroma cacao TCM_020869 I 0.684
TCM_020870 Theobroma cacao TCM_020870 I 0.686
Traes_4DS_AB2BEFAB3 Triticum aestivum Traes_4DS_AB2BEFAB3 I 0.719
Traes_6BS_4C945B9F1 Triticum aestivum Traes_6BS_4C945B9F1 I 0.701
Traes_4AS_FA4BBDBF9 Triticum aestivum Traes_4AS_FA4BBDBF9 I 0.719
Traes_4BS_180379032 Triticum aestivum Traes_4BS_180379032 I 0.719
TRIUR3_22798 Triticum urartu TRIUR3_22798 I 0.719
VIT_07s0005g03210 Vitis vinifera VIT_07s0005g03210 I 0.682
VIT_07s0005g03200 Vitis vinifera VIT_07s0005g03200 I 0.678
GRMZM2G060517 Zea mays GRMZM2G060517 I 0.725
GRMZM2G060206 Zea mays GRMZM2G060206 I 0.811