BRADI3G51630 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G51630 T001346_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.842 0.960
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.842 0.960
DREB1E
M09709_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1E_01
0.793 0.920
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.755 0.820
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.755 0.820
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.755 0.820
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.755 0.820
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.720 0.760
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.720 0.760
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.720 0.760
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.719 0.800
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.719 0.800
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.689 0.720
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.689 0.720
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.689 0.720
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.689 0.720
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.689 0.720
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.689 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G51630.1 AP2 54 105

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_00940 Aegilops tauschii F775_00940 N 0.000
BRADI2G11260 Brachypodium distachyon BRADI2G11260 N 0.000
MLOC_71056 Hordeum vulgare MLOC_71056 N 0.000
LPERR01G11210 Leersia perrieri LPERR01G11210 N 0.000
OBART01G12290 Oryza barthii OBART01G12290 N 0.000
OB01G22030 Oryza brachyantha OB01G22030 N 0.000
ORGLA01G0103700 Oryza glaberrima ORGLA01G0103700 N 0.000
OGLUM01G13750 Oryza glumaepatula OGLUM01G13750 N 0.000
ONIVA01G14500 Oryza nivara ONIVA01G14500 N 0.000
OPUNC01G11990 Oryza punctata OPUNC01G11990 N 0.000
ORUFI01G13250 Oryza rufipogon ORUFI01G13250 N 0.000
TIP2 Oryza sativa OS01G0293100 N 0.000
Pavir.Ea01473 Panicum virgatum Pavir.Ea01473 N 0.000
Pavir.Eb01270 Panicum virgatum Pavir.Eb01270 N 0.000
Sb03g011940 Sorghum bicolor Sb03g011940 N 0.000
TRIUR3_32308 Triticum urartu TRIUR3_32308 N 0.000
GRMZM2G021276 Zea mays GRMZM2G021276 N 0.000