CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G35650
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI4G35650
T001366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DREB1A
M09710_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_01
0.825
0.887
DREB1A
M09711_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SED_Q2
0.825
0.887
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.760
0.849
Q8W236_WHEAT
M09724_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF1_02
0.681
0.698
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G35650.1
AP2
54
107
PVFRGVRRRGNAGRWVCEVRVPGRRGSRLWLGTFDTAEAAARAHDAAMLALAGA
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si031001m.g
Setaria italica
Si031001m.g
I
0.873
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.873
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.873
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.869
Sb02g030330
Sorghum bicolor
Sb02g030330
I
0.867
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.865
Sb02g030340
Sorghum bicolor
Sb02g030340
I
0.863
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
0.849
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
0.844
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.841
F775_27111
Aegilops tauschii
F775_27111
I
0.838
Traes_5BL_D16B19610
Triticum aestivum
Traes_5BL_D16B19610
I
0.838
Pavir.J03891
Panicum virgatum
Pavir.J03891
I
0.829
Si030998m.g
Setaria italica
Si030998m.g
I
0.829
OMERI09G12490
Oryza meridionalis
OMERI09G12490
I
0.825
OPUNC09G15290
Oryza punctata
OPUNC09G15290
I
0.825
DREB1A
Oryza sativa
OS09G0522200
D
0.825
OGLUM09G17430
Oryza glumaepatula
OGLUM09G17430
I
0.825
ORUFI09G18210
Oryza rufipogon
ORUFI09G18210
I
0.825
DREB1A
Oryza indica
BGIOSGA029415
I
0.825
ONIVA09G17900
Oryza nivara
ONIVA09G17900
I
0.825
OBART09G16810
Oryza barthii
OBART09G16810
I
0.825
Pavir.Ba01280
Panicum virgatum
Pavir.Ba01280
I
0.824
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.820
GRMZM2G069126
Zea mays
GRMZM2G069126
I
0.816
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.804
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
0.804
OBART09G16830
Oryza barthii
OBART09G16830
I
0.780
GRMZM2G124037
Zea mays
GRMZM2G124037
I
0.764
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.764
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.760
GRMZM2G069082
Zea mays
GRMZM2G069082
I
0.758
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
0.733
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.731
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.731
Sb07g025210
Sorghum bicolor
Sb07g025210
N
0.725
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
0.725
Pavir.Fb02246
Panicum virgatum
Pavir.Fb02246
I
0.723
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.722
Sb02g030300
Sorghum bicolor
Sb02g030300
I
0.714
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
0.699
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.698
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.698
DREB1H
Oryza indica
BGIOSGA029416
I
0.692
DREB1H
Oryza sativa
OS09G0522100
I
0.692
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.692
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.692
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.692
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.692
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
0.691
F775_19112
Aegilops tauschii
F775_19112
N
0.689
ORGLA09G0133000
Oryza glaberrima
ORGLA09G0133000
N
0.686
DREB1B
Oryza indica
BGIOSGA029417
N
0.686
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.686
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.686
Q8W236_WHEAT
Triticum aestivum
Q8W236_WHEAT
D
0.681
BRADI4G35620
Brachypodium distachyon
BRADI4G35620
I
0.680
Traes_5BL_B795CE108
Triticum aestivum
Traes_5BL_B795CE108
I
0.679
MLOC_59224
Hordeum vulgare
MLOC_59224
I
0.679
Traes_5DL_45B242D3E1
Triticum aestivum
Traes_5DL_45B242D3E1
I
0.679
BRADI4G35590
Brachypodium distachyon
BRADI4G35590
N
0.678