BRADI5G24100 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI5G24100 T001380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.858 0.969
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.828 0.908
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.827 0.918
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.817 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G24100.1 AP2 109 158
BRADI5G24100.1 AP2 200 251

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.868
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.868
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.868
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.868
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.868
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.868
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.868
Si012635m.g Setaria italica Si012635m.g I 0.868
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.868
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.868
TCM_000665 Theobroma cacao TCM_000665 I 0.860
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.860
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.860
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.860
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.859
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.858
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.858
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.858
Ca_09295 Cicer arietinum Ca_09295 I 0.858
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.858
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.858
AP2 Arabidopsis thaliana AT4G36920 I 0.858
Bo7g118400 Brassica oleracea Bo7g118400 I 0.858
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.858
Bo1g004960 Brassica oleracea Bo1g004960 I 0.858
Bra011741 Brassica rapa Bra011741 I 0.858
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.858
mgf009315m Mimulus guttatus mgf009315m I 0.858
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.858
Bra017809 Brassica rapa Bra017809 I 0.858
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.857
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.857
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.857
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.857
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.857
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.857
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.857
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.857
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.857
Cla000716 Citrullus lanatus Cla000716 I 0.857
PK02403.1 Cannabis sativa PK02403.1 I 0.857
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.857
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.857
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.857
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.857
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.857
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.856
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.856
29805.m001494 Ricinus communis 29805.m001494 I 0.855
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.855
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.854
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.850
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.849
Si025305m.g Setaria italica Si025305m.g I 0.849
28752.m000339 Ricinus communis 28752.m000339 I 0.849
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.849
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.849
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.849
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.849
OS05G0121600 Oryza sativa OS05G0121600 I 0.849
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.849
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.849
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.849
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.849
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.849
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.849
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.849
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.849
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.849
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.849
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.849
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.849
Ca_02499 Cicer arietinum Ca_02499 I 0.849
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.849
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.849
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.849
MDP0000200319 Malus domestica MDP0000200319 I 0.848
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.848
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.848
Pm002492 Prunus mume Pm002492 I 0.848
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.848
TCM_022077 Theobroma cacao TCM_022077 I 0.848
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.848
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.848
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.848
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.848
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.848
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.848
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.847
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.847
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.847
F775_32962 Aegilops tauschii F775_32962 I 0.847
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.847
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.847
TCM_042000 Theobroma cacao TCM_042000 I 0.847
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.847
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.847
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.846
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.846
PK07183.1 Cannabis sativa PK07183.1 I 0.846
29169.m000017 Ricinus communis 29169.m000017 I 0.846
mgf021945m Mimulus guttatus mgf021945m I 0.846
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.846
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.846
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.845
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.845
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.844
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.844
MDP0000181606 Malus domestica MDP0000181606 I 0.844
Pm000974 Prunus mume Pm000974 I 0.844
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.844
Cla018124 Citrullus lanatus Cla018124 I 0.843
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.843
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.843
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.842
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.842
MDP0000137561 Malus domestica MDP0000137561 I 0.841
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.841
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.840
Pm030172 Prunus mume Pm030172 I 0.840
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.840
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.840
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.839
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.838
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.838
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.838
OB06G29960 Oryza brachyantha OB06G29960 I 0.838
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.838
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.838
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.838
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.838
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.838
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.838
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.838
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.838
Ca_14618 Cicer arietinum Ca_14618 I 0.837
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.837
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.837
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.834
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.832
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.832
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.831
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.831
Ca_12010 Cicer arietinum Ca_12010 I 0.831
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.830
OBART07G08110 Oryza barthii OBART07G08110 I 0.830
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.830
OB03G45870 Oryza brachyantha OB03G45870 I 0.830
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.830
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.830
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.830
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.830
OS07G0235800 Oryza sativa OS07G0235800 I 0.830
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.830
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.830
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.830
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.830
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.830
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.828
Si029636m.g Setaria italica Si029636m.g I 0.828
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.828
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.828
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.828
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.828
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.828
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.827
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.827
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.827
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.827
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.827
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.827
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.827
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.827
Si036068m.g Setaria italica Si036068m.g I 0.827
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.827
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.827
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.827
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.827
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.826
Bo4g070350 Brassica oleracea Bo4g070350 I 0.826
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.826
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.826
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.826
Bra011939 Brassica rapa Bra011939 I 0.826
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.826
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.825
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.825
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.824
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.824
mgf005133m Mimulus guttatus mgf005133m I 0.822
mgf010466m Mimulus guttatus mgf010466m I 0.822
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.822
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.821
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.820
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.819
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.819
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.819
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.817
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.817
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.817
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.817
P93632_MAIZE Zea mays P93632_MAIZE D 0.817
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.816
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.812
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.810
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.810
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.809
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.808
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.808
MDP0000163645 Malus domestica MDP0000163645 I 0.808
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.807
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.807
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.806
TOE3 Arabidopsis thaliana AT5G67180 I 0.806
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.806
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.806
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.806
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.806
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.806
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.806
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.804
Bo7g064000 Brassica oleracea Bo7g064000 I 0.803
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.803
Bra012139 Brassica rapa Bra012139 I 0.803
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.795
OS03G0818800 Oryza sativa OS03G0818800 I 0.795
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.793
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.791
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.789
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.785
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.785
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.785
Cla020549 Citrullus lanatus Cla020549 I 0.783
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.770
Cla018549 Citrullus lanatus Cla018549 I 0.765
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.715
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.714
Si006371m.g Setaria italica Si006371m.g I 0.705
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689