BRADI5G25570 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI5G25570 T001386_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.688 0.840
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.688 0.840
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.688 0.840
ERF8
M01608_2.00
Arabidopsis thaliana
MGCCGNMNNN

NNNKNCGGCK
PBM
Weirauch et al.(2014)
pTH8095
0.678 0.760
ERF8
M06586_2.00
Arabidopsis thaliana
NYHDYCKCCGCCGYH

DRCGGCGGMGRHDRN
Dap-seq
OMalley et al.(2016)
ERF8_col_a
0.678 0.760
ERF8
M06587_2.00
Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN

NHDDYGRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ERF8_colamp_a
0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G25570.1 AP2 22 73

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27904.m000217 Ricinus communis 27904.m000217 I 0.685
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.697
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.696
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.697
ATERF-8 Arabidopsis lyrata fgenesh2_kg.1__4394__AT1G53170.1 I 0.677
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.680
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.687
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.791
BGIOSGA017088 Oryza indica BGIOSGA017088 I 0.717
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.687
BGIOSGA032849 Oryza indica BGIOSGA032849 I 0.695
Bo1g108970 Brassica oleracea Bo1g108970 I 0.699
Bo1g129710 Brassica oleracea Bo1g129710 I 0.733
Bo2g122260 Brassica oleracea Bo2g122260 I 0.677
Bo3g066710 Brassica oleracea Bo3g066710 I 0.683
Bo3g074840 Brassica oleracea Bo3g074840 I 0.722
Bo3g143350 Brassica oleracea Bo3g143350 I 0.704
Bo5g109800 Brassica oleracea Bo5g109800 I 0.697
Bo6g031240 Brassica oleracea Bo6g031240 I 0.690
Bo7g048170 Brassica oleracea Bo7g048170 I 0.708
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.704
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.683
Bra001588 Brassica rapa Bra001588 I 0.683
Bra001784 Brassica rapa Bra001784 I 0.722
Bra010880 Brassica rapa Bra010880 I 0.704
Bra018864 Brassica rapa Bra018864 I 0.693
Bra021594 Brassica rapa Bra021594 I 0.728
Bra030095 Brassica rapa Bra030095 I 0.708
Bra030957 Brassica rapa Bra030957 I 0.679
Bra035792 Brassica rapa Bra035792 I 0.697
Bra036016 Brassica rapa Bra036016 I 0.677
Bra038261 Brassica rapa Bra038261 I 0.699
Bra039658 Brassica rapa Bra039658 I 0.699
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.678
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.715
BRADI5G21250 Brachypodium distachyon BRADI5G21250 I 0.720
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.713
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.713
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.689
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.685
Ca_11261 Cicer arietinum Ca_11261 I 0.680
Ca_20544 Cicer arietinum Ca_20544 I 0.708
Ca_22534 Cicer arietinum Ca_22534 I 0.686
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.685
Cla023722 Citrullus lanatus Cla023722 I 0.678
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.685
ERF7 Arabidopsis thaliana AT3G20310 D 0.688
ERF8 Arabidopsis thaliana AT1G53170 D 0.678
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.678
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.695
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.685
F775_20810 Aegilops tauschii F775_20810 I 0.697
F775_25471 Aegilops tauschii F775_25471 I 0.677
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.705
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.721
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.677
GLYMA07G23225 Glycine max GLYMA07G23225 I 0.708
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.710
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.685
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.677
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.680
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.677
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.700
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.679
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.713
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.678
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.687
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.693
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.686
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.680
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.711
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.685
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.707
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.690
GRMZM2G068967 Zea mays GRMZM2G068967 I 0.724
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.715
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.707
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.715
GRMZM2G438202 Zea mays GRMZM2G438202 I 0.724
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.682
GSMUA_Achr10G09150_001 Musa acuminata GSMUA_Achr10G09150_001 I 0.678
GSMUA_Achr11G25600_001 Musa acuminata GSMUA_Achr11G25600_001 I 0.692
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.681
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.696
gw1.130.147.1 Physcomitrella patens gw1.130.147.1 I 0.678
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.726
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.687
LPERR04G20430 Leersia perrieri LPERR04G20430 I 0.717
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.698
mgf019214m Mimulus guttatus mgf019214m I 0.680
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.679
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.677
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.708
OBART03G06100 Oryza barthii OBART03G06100 I 0.680
OBART04G25320 Oryza barthii OBART04G25320 I 0.717
OBART07G26160 Oryza barthii OBART07G26160 N 0.687
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.718
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.684
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.680
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.687
OGLUM04G24780 Oryza glumaepatula OGLUM04G24780 I 0.717
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.791
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.687
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.695
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.718
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.680
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.687
OMERI04G20480 Oryza meridionalis OMERI04G20480 I 0.717
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.791
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.687
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.695
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.684
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.680
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.687
ONIVA04G24000 Oryza nivara ONIVA04G24000 I 0.717
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.791
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.687
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.695
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.726
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.681
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.687
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.679
OPUNC04G22340 Oryza punctata OPUNC04G22340 I 0.711
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.687
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.685
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.718
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.684
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.680
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.687
ORGLA04G0219400 Oryza glaberrima ORGLA04G0219400 I 0.717
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.687
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I 0.695
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.718
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.684
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.687
ORUFI04G26530 Oryza rufipogon ORUFI04G26530 I 0.717
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.791
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.687
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.695
OS03G0183300 Oryza sativa OS03G0183300 I 0.680
OS03G0341000 Oryza sativa OS03G0341000 N 0.687
OS04G0610400 Oryza sativa OS04G0610400 I 0.717
OS04G0669200 Oryza sativa OS04G0669200 I 0.791
OS07G0674800 Oryza sativa OS07G0674800 N 0.687
OS10G0390800 Oryza sativa OS10G0390800 I 0.695
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.715
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.715
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.690
Pavir.Ba02999 Panicum virgatum Pavir.Ba02999 N 0.691
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.690
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.685
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.703
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.685
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.707
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.707
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.797
Pavir.Ga00485 Panicum virgatum Pavir.Ga00485 I 0.724
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.797
Pavir.Gb00545 Panicum virgatum Pavir.Gb00545 I 0.728
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.680
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.684
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.695
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.694
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.682
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.699
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.686
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.686
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.678
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.686
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.682
Sb02g020910 Sorghum bicolor Sb02g020910 N 0.704
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.690
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.715
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.679
Sb06g028090 Sorghum bicolor Sb06g028090 I 0.724
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.707
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.707
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.707
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.707
Sb09g024400 Sorghum bicolor Sb09g024400 I 0.678
Si010228m.g Setaria italica Si010228m.g I 0.724
Si014469m.g Setaria italica Si014469m.g I 0.707
Si014474m.g Setaria italica Si014474m.g I 0.684
Si023330m.g Setaria italica Si023330m.g I 0.797
Si030741m.g Setaria italica Si030741m.g N 0.704
Si031079m.g Setaria italica Si031079m.g I 0.690
Si036118m.g Setaria italica Si036118m.g I 0.680
Si038911m.g Setaria italica Si038911m.g I 0.679
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.691
Solyc07g053740.1 Solanum lycopersicum Solyc07g053740.1 I 0.677
TCM_008162 Theobroma cacao TCM_008162 I 0.677
TCM_026234 Theobroma cacao TCM_026234 I 0.679
TCM_031608 Theobroma cacao TCM_031608 I 0.685
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.688
Thhalv10011796m.g Eutrema salsugineum Thhalv10011796m.g I 0.679
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.710
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.677
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.679
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.700
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.679
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.679
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.679
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.687