fgenesh2_kg.1__103__AT1G01250.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.1__103__AT1G01250.1 T001634_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF023
M06560_2.00 		Arabidopsis thaliana
DYCACCGACANHDNN
NNHDNTGTCGGTGRH		 Dap-seq
OMalley et al.(2016)
AT1G01250_col_a 		0.842 1.000
ERF023
M06561_2.00 		Arabidopsis thaliana
HHNHHDHCACCGACA
TGTCGGTGDHDDNDD		 Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a 		0.842 1.000
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__103__AT1G01250.1 AP2 37 88

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action