CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF11
(
Arabidopsis lyrata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
fgenesh2_kg.1__3005__AT1G28370.1
T001645_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.765
0.980
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.765
0.980
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.765
0.980
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC
GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.681
0.765
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.681
0.765
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.681
0.765
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.677
0.765
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD
HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.677
0.765
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.1__3005__AT1G28370.1
AP2
18
69
VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEAAARAYDKRAIEFRGA
Links
Other
AP2
family TFs
Other
Arabidopsis lyrata
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF11
Arabidopsis thaliana
AT1G28370
D
0.765
Bo3g143350
Brassica oleracea
Bo3g143350
I
0.758
Bra010880
Brassica rapa
Bra010880
I
0.758
Bra030095
Brassica rapa
Bra030095
I
0.754
Bo7g048170
Brassica oleracea
Bo7g048170
I
0.754
Bra021594
Brassica rapa
Bra021594
I
0.750
Bo1g129710
Brassica oleracea
Bo1g129710
I
0.740
Pavir.Gb00545
Panicum virgatum
Pavir.Gb00545
I
0.739
ORGLA04G0219400
Oryza glaberrima
ORGLA04G0219400
I
0.714
ORUFI04G26530
Oryza rufipogon
ORUFI04G26530
I
0.714
OS04G0610400
Oryza sativa
OS04G0610400
I
0.714
OPUNC04G22340
Oryza punctata
OPUNC04G22340
I
0.714
OMERI04G20480
Oryza meridionalis
OMERI04G20480
I
0.714
LPERR04G20430
Leersia perrieri
LPERR04G20430
I
0.714
OBART04G25320
Oryza barthii
OBART04G25320
I
0.714
OGLUM04G24780
Oryza glumaepatula
OGLUM04G24780
I
0.714
ONIVA04G24000
Oryza nivara
ONIVA04G24000
I
0.714
BGIOSGA017088
Oryza indica
BGIOSGA017088
I
0.714
cassava21882.m1
Manihot esculenta
cassava21882.m1
I
0.713
Gorai.008G100500
Gossypium raimondii
Gorai.008G100500
I
0.713
Sb06g028090
Sorghum bicolor
Sb06g028090
I
0.712
GRMZM2G068967
Zea mays
GRMZM2G068967
I
0.712
Si010228m.g
Setaria italica
Si010228m.g
I
0.712
Pavir.Ga00485
Panicum virgatum
Pavir.Ga00485
I
0.712
GRMZM2G438202
Zea mays
GRMZM2G438202
I
0.711
Bra003701
Brassica rapa
Bra003701
I
0.710
evm.TU.supercontig_72.47
Carica papaya
evm.TU.supercontig_72.47
I
0.707
27965.m000108
Ricinus communis
27965.m000108
I
0.707
cassava14079.valid.m1
Manihot esculenta
cassava14079.valid.m1
I
0.707
Solyc03g006320.1
Solanum lycopersicum
Solyc03g006320.1
I
0.706
SapurV1A.0787s0040
Salix purpurea
SapurV1A.0787s0040
I
0.704
BRADI5G21250
Brachypodium distachyon
BRADI5G21250
I
0.702
PRUPE_ppa010982mg
Prunus persica
PRUPE_ppa010982mg
I
0.702
GLYMA07G23225
Glycine max
GLYMA07G23225
I
0.702
Pm011391
Prunus mume
Pm011391
I
0.702
Bostr.0124s0109
Boechera stricta
Bostr.0124s0109
I
0.700
POPTR_0005s08940
Populus trichocarpa
POPTR_0005s08940
I
0.700
MTR_2g078680
Medicago truncatula
MTR_2g078680
I
0.699
MDP0000324718
Malus domestica
MDP0000324718
I
0.698
GSMUA_Achr8G06870_001
Musa acuminata
GSMUA_Achr8G06870_001
I
0.698
GSMUA_Achr3G23710_001
Musa acuminata
GSMUA_Achr3G23710_001
I
0.698
Pm028829
Prunus mume
Pm028829
I
0.695
PRUPE_ppa006595mg
Prunus persica
PRUPE_ppa006595mg
I
0.695
VIT_19s0014g02240
Vitis vinifera
VIT_19s0014g02240
I
0.695
MDP0000186131
Malus domestica
MDP0000186131
I
0.695
MDP0000226099
Malus domestica
MDP0000226099
I
0.695
Bra027270
Brassica rapa
Bra027270
I
0.694
Bo5g127380
Brassica oleracea
Bo5g127380
I
0.694
gene21091-v1.0-hybrid
Fragaria vesca
gene21091-v1.0-hybrid
I
0.694
GLYMA04G39510
Glycine max
GLYMA04G39510
I
0.694
MDP0000229036
Malus domestica
MDP0000229036
I
0.693
Thhalv10003431m.g
Eutrema salsugineum
Thhalv10003431m.g
I
0.692
29983.m003147
Ricinus communis
29983.m003147
I
0.692
Gorai.008G075600
Gossypium raimondii
Gorai.008G075600
I
0.692
MTR_3g095190
Medicago truncatula
MTR_3g095190
I
0.691
Ca_04147
Cicer arietinum
Ca_04147
I
0.691
chr1.CM0032.40.nd
Lotus japonicus
chr1.CM0032.40.nd
I
0.691
Cla009795
Citrullus lanatus
Cla009795
I
0.690
GSMUA_Achr9G11480_001
Musa acuminata
GSMUA_Achr9G11480_001
I
0.690
GLYMA12G35550
Glycine max
GLYMA12G35550
I
0.689
orange1.1g028454m.g
Citrus sinensis
orange1.1g028454m.g
I
0.689
TCM_031608
Theobroma cacao
TCM_031608
I
0.689
Gorai.009G375700
Gossypium raimondii
Gorai.009G375700
I
0.689
Ciclev10009484m.g
Citrus clementina
Ciclev10009484m.g
I
0.689
evm.TU.supercontig_131.83
Carica papaya
evm.TU.supercontig_131.83
I
0.689
cassava46560.m1
Manihot esculenta
cassava46560.m1
I
0.689
GSMUA_Achr10G09560_001
Musa acuminata
GSMUA_Achr10G09560_001
I
0.689
Gorai.002G067600
Gossypium raimondii
Gorai.002G067600
I
0.689
GLYMA13G34920
Glycine max
GLYMA13G34920
I
0.689
27904.m000217
Ricinus communis
27904.m000217
I
0.689
GLYMA12G26836
Glycine max
GLYMA12G26836
I
0.689
POPTR_0011s11620
Populus trichocarpa
POPTR_0011s11620
I
0.688
SapurV1A.1325s0040
Salix purpurea
SapurV1A.1325s0040
I
0.688
gene00975-v1.0-hybrid
Fragaria vesca
gene00975-v1.0-hybrid
I
0.688
POPTR_0001s40770
Populus trichocarpa
POPTR_0001s40770
I
0.688
Aquca_013_00161
Aquilegia coerulea
Aquca_013_00161
I
0.688
Eucgr.F01164
Eucalyptus grandis
Eucgr.F01164
I
0.688
Pavir.J17038
Panicum virgatum
Pavir.J17038
I
0.688
SapurV1A.1244s0010
Salix purpurea
SapurV1A.1244s0010
I
0.688
AMTR_s00077p00176570
Amborella trichopoda
AMTR_s00077p00176570
I
0.686
Cagra.0897s0005
Capsella grandiflora
Cagra.0897s0005
I
0.686
cassava37846.valid.m1
Manihot esculenta
cassava37846.valid.m1
I
0.686
Bra036016
Brassica rapa
Bra036016
I
0.686
Carubv10011371m.g
Capsella rubella
Carubv10011371m.g
I
0.686
Bo2g122260
Brassica oleracea
Bo2g122260
I
0.686
GSMUA_Achr6G02310_001
Musa acuminata
GSMUA_Achr6G02310_001
I
0.686
MDP0000868587
Malus domestica
MDP0000868587
I
0.686
Gorai.011G114900
Gossypium raimondii
Gorai.011G114900
I
0.685
Ca_22534
Cicer arietinum
Ca_22534
I
0.685
LPERR11G03740
Leersia perrieri
LPERR11G03740
I
0.685
Gorai.009G255400
Gossypium raimondii
Gorai.009G255400
I
0.685
GLYMA06G35710
Glycine max
GLYMA06G35710
I
0.685
Carubv10014552m.g
Capsella rubella
Carubv10014552m.g
I
0.684
Thhalv10021456m.g
Eutrema salsugineum
Thhalv10021456m.g
I
0.684
Carubv10027246m.g
Capsella rubella
Carubv10027246m.g
I
0.684
Cagra.0381s0006
Capsella grandiflora
Cagra.0381s0006
I
0.684
GSMUA_Achr8G15830_001
Musa acuminata
GSMUA_Achr8G15830_001
I
0.683
Bra030957
Brassica rapa
Bra030957
I
0.683
Thhalv10011796m.g
Eutrema salsugineum
Thhalv10011796m.g
I
0.683
RRTF1
Vitis vinifera
VIT_03s0063g00460
I
0.683
TCM_001301
Theobroma cacao
TCM_001301
I
0.682
Lus10028679.g
Linum usitatissimum
Lus10028679.g
I
0.682
ERF110
Arabidopsis lyrata
fgenesh2_kg.8__881__AT5G50080.1
I
0.682
Cagra.14503s0008
Capsella grandiflora
Cagra.14503s0008
I
0.682
GRMZM2G457562
Zea mays
GRMZM2G457562
I
0.682
Carubv10010374m.g
Capsella rubella
Carubv10010374m.g
I
0.682
Cagra.1472s0014
Capsella grandiflora
Cagra.1472s0014
I
0.682
OPUNC05G15760
Oryza punctata
OPUNC05G15760
I
0.682
Solyc10g009110.1
Solanum lycopersicum
Solyc10g009110.1
I
0.682
LPERR05G14130
Leersia perrieri
LPERR05G14130
I
0.682
ERF110
Arabidopsis thaliana
AT5G50080
I
0.682
Q84XB1_SOLLC
Solanum lycopersicum
Q84XB1_SOLLC
I
0.682
Q84LQ6_SOLLC
Solanum lycopersicum
Q84LQ6_SOLLC
I
0.682
OPUNC11G03940
Oryza punctata
OPUNC11G03940
I
0.682
GSMUA_AchrUn_randomG16100_001
Musa acuminata
GSMUA_AchrUn_randomG16100_001
I
0.682
ERF4
Arabidopsis thaliana
AT3G15210
D
0.681
Bra001588
Brassica rapa
Bra001588
I
0.681
ATERF-4
Arabidopsis lyrata
scaffold_301765.1
I
0.681
Bo3g066710
Brassica oleracea
Bo3g066710
I
0.681
Bostr.28625s0184
Boechera stricta
Bostr.28625s0184
I
0.681
gene29738-v1.0-hybrid
Fragaria vesca
gene29738-v1.0-hybrid
I
0.680
evm.TU.supercontig_27.16
Carica papaya
evm.TU.supercontig_27.16
I
0.680
Lus10015415.g
Linum usitatissimum
Lus10015415.g
I
0.680
orange1.1g026240m.g
Citrus sinensis
orange1.1g026240m.g
I
0.680
Gorai.010G155900
Gossypium raimondii
Gorai.010G155900
I
0.680
MTR_6g037610
Medicago truncatula
MTR_6g037610
I
0.680
Gorai.006G088000
Gossypium raimondii
Gorai.006G088000
I
0.680
TCM_029820
Theobroma cacao
TCM_029820
I
0.680
PK02602.1
Cannabis sativa
PK02602.1
I
0.680
cassava1589.valid.m1
Manihot esculenta
cassava1589.valid.m1
I
0.680
cassava20937.m1
Manihot esculenta
cassava20937.m1
I
0.680
30190.m011321
Ricinus communis
30190.m011321
I
0.680
BRADI2G56140
Brachypodium distachyon
BRADI2G56140
I
0.680
Ciclev10016463m.g
Citrus clementina
Ciclev10016463m.g
I
0.680
Aquca_036_00070
Aquilegia coerulea
Aquca_036_00070
I
0.680
GLYMA10G36760
Glycine max
GLYMA10G36760
I
0.679
Cucsa.363830
Cucumis sativus
Cucsa.363830
I
0.679
Cla014021
Citrullus lanatus
Cla014021
I
0.679
cassava12737.valid.m1
Manihot esculenta
cassava12737.valid.m1
I
0.679
29863.m001066
Ricinus communis
29863.m001066
I
0.679
orange1.1g013225m.g
Citrus sinensis
orange1.1g013225m.g
I
0.679
Pm022509
Prunus mume
Pm022509
I
0.679
MDP0000242979
Malus domestica
MDP0000242979
I
0.679
MDP0000235028
Malus domestica
MDP0000235028
I
0.679
Gorai.010G131500
Gossypium raimondii
Gorai.010G131500
I
0.679
Ciclev10001138m.g
Citrus clementina
Ciclev10001138m.g
I
0.679
Carubv10028647m.g
Capsella rubella
Carubv10028647m.g
I
0.679
evm.TU.supercontig_49.94
Carica papaya
evm.TU.supercontig_49.94
I
0.679
SapurV1A.0134s0150
Salix purpurea
SapurV1A.0134s0150
I
0.679
Eucgr.F04203
Eucalyptus grandis
Eucgr.F04203
I
0.679
GLYMA20G30835
Glycine max
GLYMA20G30835
I
0.679
Gorai.005G078100
Gossypium raimondii
Gorai.005G078100
I
0.679
ERF110
Vitis vinifera
VIT_18s0072g00260
I
0.679
POPTR_0017s04540
Populus trichocarpa
POPTR_0017s04540
I
0.679
PGSC0003DMG400012828
Solanum tuberosum
PGSC0003DMG400012828
I
0.678
BRADI2G52370
Brachypodium distachyon
BRADI2G52370
I
0.678
PGSC0003DMG400022823
Solanum tuberosum
PGSC0003DMG400022823
I
0.678
VIT_10s0003g00140
Vitis vinifera
VIT_10s0003g00140
I
0.678
Sb05g004170
Sorghum bicolor
Sb05g004170
I
0.678
SapurV1A.0012s0580
Salix purpurea
SapurV1A.0012s0580
I
0.677
SapurV1A.0826s0010
Salix purpurea
SapurV1A.0826s0010
I
0.677
PK19363.1
Cannabis sativa
PK19363.1
D
0.677
VIT_07s0031g00710
Vitis vinifera
VIT_07s0031g00710
I
0.677
ORGLA11G0040400
Oryza glaberrima
ORGLA11G0040400
I
0.677
ORUFI11G04200
Oryza rufipogon
ORUFI11G04200
I
0.677
ONIVA11G04340
Oryza nivara
ONIVA11G04340
I
0.677
OGLUM11G04050
Oryza glumaepatula
OGLUM11G04050
I
0.677
BGIOSGA034432
Oryza indica
BGIOSGA034432
I
0.677
OS11G0168500
Oryza sativa
OS11G0168500
I
0.677
POPTR_0004s04720
Populus trichocarpa
POPTR_0004s04720
I
0.677
Ciclev10016276m.g
Citrus clementina
Ciclev10016276m.g
I
0.677
Pavir.Ha01720
Panicum virgatum
Pavir.Ha01720
I
0.677
TRAES3BF075600050CFD_g
Triticum aestivum
TRAES3BF075600050CFD_g
I
0.677
Si026709m.g
Setaria italica
Si026709m.g
I
0.677
POPTR_0011s05580
Populus trichocarpa
POPTR_0011s05580
I
0.677
Pavir.Hb01784
Panicum virgatum
Pavir.Hb01784
I
0.677