fgenesh2_kg.2__1828__AT1G75490.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.2__1828__AT1G75490.1 T001658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.803 1.000
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.803 1.000
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.803 1.000
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.724 0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.700 0.837
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.683 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1828__AT1G75490.1 AP2 31 82

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_080260 Acremonium chrysogenum ACRE_080260 N 0.000
CADAFLAG00009480 Aspergillus flavus CADAFLAG00009480 I 0.000
PVAR5_8873 Byssochlamys spectabilis PVAR5_8873 N 0.000
A1O1_07586 Capronia coronata A1O1_07586 N 0.000
Z519_00213 Cladophialophora bantiana Z519_00213 N 0.000
Z519_02517 Cladophialophora bantiana Z519_02517 N 0.000
G647_01556 Cladophialophora carrionii G647_01556 N 0.000
PV07_06280 Cladophialophora immunda PV07_06280 I 0.000
PV07_06957 Cladophialophora immunda PV07_06957 I 0.000
A1O5_00212 Cladophialophora psammophila A1O5_00212 N 0.000
CCM_09227 Cordyceps militaris CCM_09227 I 0.000
PV10_03184 Exophiala mesophila PV10_03184 N 0.000
PV11_00229 Exophiala sideris PV11_00229 N 0.000
PV05_04579 Exophiala xenobiotica PV05_04579 N 0.000
PV05_03926 Exophiala xenobiotica PV05_03926 N 0.000
Z517_10643 Fonsecaea pedrosoi Z517_10643 I 0.000
Z517_09459 Fonsecaea pedrosoi Z517_09459 N 0.000
PMAA_073800 Penicillium marneffei PMAA_073800 N 0.000
SPBR_02468 Sporothrix brasiliensis SPBR_02468 N 0.000
S40288_04988 Stachybotrys chartarum S40288_04988 I 0.000
PMAA_073800 Talaromyces marneffei PMAA_073800 N 0.000
TSTA_002040 Talaromyces stipitatus TSTA_002040 N 0.000
TRIATDRAFT_34766 Trichoderma atroviride TRIATDRAFT_34766 N 0.000