CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.4__494__AT2G25820.1
(
Arabidopsis lyrata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
fgenesh2_kg.4__494__AT2G25820.1
T001677_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__494__AT2G25820.1
AP2
21
76
PKEKGVYHGARMRSWGKWVSEIREPSKKSRIWLGTFPTAEMAARAHDVAALSIKGS
Links
Other
AP2
family TFs
Other
Arabidopsis lyrata
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr4G26980_001
Musa acuminata
GSMUA_Achr4G26980_001
N
0.727
GSMUA_AchrUn_randomG27090_001
Musa acuminata
GSMUA_AchrUn_randomG27090_001
N
0.727
Eucgr.C00590
Eucalyptus grandis
Eucgr.C00590
N
0.722
GSMUA_Achr5G06570_001
Musa acuminata
GSMUA_Achr5G06570_001
N
0.719
XM_002324763.1
Populus trichocarpa
POPTR_0018s00270
N
0.719
GSMUA_Achr5G15330_001
Musa acuminata
GSMUA_Achr5G15330_001
N
0.710
GSMUA_Achr5G13500_001
Musa acuminata
GSMUA_Achr5G13500_001
N
0.710
Ca_22502
Cicer arietinum
Ca_22502
N
0.685
GSMUA_Achr7G06970_001
Musa acuminata
GSMUA_Achr7G06970_001
N
0.682
Traes_2DL_D2EA554EA
Triticum aestivum
Traes_2DL_D2EA554EA
N
0.677