SMZ (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.5__1910__AT3G54990.1 T001682_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMZ
M08402_2.00 		Arabidopsis thaliana
YCTCGTAC
GTACGAGR		 ChIP-chip
Mathelier et al.(2014)
MA0553.1 		0.869 1.000
TOE2
M00851_2.00 		Arabidopsis thaliana
NNNNTACGAGGWN
NWCCTCGTANNNN		 PBM
Franco-Zorrilla et al.(2014)
TOE2 		0.855 0.959
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1910__AT3G54990.1 AP2 121 171

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action