fgenesh2_kg.5__2201__AT3G57600.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.5__2201__AT3G57600.1 T001683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.820 1.000
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.755 0.880
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.680 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__2201__AT3G57600.1 AP2 26 77

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.820
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.820
DREB2F Arabidopsis thaliana AT3G57600 D 0.820
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.820
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.808
Bo6g073020 Brassica oleracea Bo6g073020 I 0.800
Bo4g111040 Brassica oleracea Bo4g111040 I 0.799
Bra014617 Brassica rapa Bra014617 I 0.799
Bo8g092010 Brassica oleracea Bo8g092010 I 0.797
Bra007341 Brassica rapa Bra007341 I 0.797
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.777
TCM_024756 Theobroma cacao TCM_024756 I 0.775
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.775
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.775
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.769
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.769
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.768
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.767
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.767
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.767
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.766
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.765
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.765
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.765
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.765
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.765
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.765
27810.m000639 Ricinus communis 27810.m000639 I 0.765
Ca_07264 Cicer arietinum Ca_07264 I 0.765
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.765
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.765
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.765
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.765
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.762
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.761
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.761
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.761
OBART03G05550 Oryza barthii OBART03G05550 I 0.761
DREB2E Oryza sativa OS03G0174400 I 0.761
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.761
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.761
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.761
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.761
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.761
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.761
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.761
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.761
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.761
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.761
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.760
MDP0000871361 Malus domestica MDP0000871361 I 0.759
Pm025865 Prunus mume Pm025865 I 0.759
MDP0000703626 Malus domestica MDP0000703626 I 0.759
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.759
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.755
PK08602.1 Cannabis sativa PK08602.1 D 0.755
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.755
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.753
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.753
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.752
Cla017778 Citrullus lanatus Cla017778 I 0.752
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.752
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.744
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.744
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.741
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.721
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.714
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.685
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.684
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.684
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.680
Bo9g155940 Brassica oleracea Bo9g155940 I 0.680
DREB2G Arabidopsis thaliana AT5G18450 D 0.680
Bra002159 Brassica rapa Bra002159 I 0.680
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.680
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.680
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.680
Pm003634 Prunus mume Pm003634 I 0.679
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.677