fgenesh2_kg.7__195__AT4G39780.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.7__195__AT4G39780.1 T001698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.845 0.920
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.832 0.900
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.832 0.900
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN

NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.708 0.840
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW

WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.708 0.840
ERF054
M06647_2.00
Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC

GDCGGYGSHDDNNNNNNNNN
Dap-seq
OMalley et al.(2016)
At4g28140_col_a
0.680 0.820
ERF054
M06648_2.00
Arabidopsis thaliana
NNNNHDBCRCCGHCM

KGDCGGYGVHDNNNN
Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a
0.680 0.820
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.677 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__195__AT4G39780.1 AP2 96 147

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

459 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000771 Aedes aegypti AAEL000771 N 0.000
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.000
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.000
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.000
AALB009867 Anopheles albimanus AALB009867 N 0.000
AALB009772 Anopheles albimanus AALB009772 N 0.000
AATE015714 Anopheles atroparvus AATE015714 N 0.000
ACOM026653 Anopheles coluzzii ACOM026653 N 0.000
ACOM022799 Anopheles coluzzii ACOM022799 N 0.000
ACUA012732 Anopheles culicifacies ACUA012732 N 0.000
ACUA010594 Anopheles culicifacies ACUA010594 N 0.000
ADIR009661 Anopheles dirus ADIR009661 N 0.000
ADIR005631 Anopheles dirus ADIR005631 N 0.000
AEPI003629 Anopheles epiroticus AEPI003629 N 0.000
AEPI007948 Anopheles epiroticus AEPI007948 N 0.000
AFUN009317 Anopheles funestus AFUN009317 N 0.000
AFUN010198 Anopheles funestus AFUN010198 N 0.000
AGAP028091 Anopheles gambiae AGAP028091 N 0.000
AMAM023617 Anopheles maculatus AMAM023617 N 0.000
AMEC011653 Anopheles melas AMEC011653 N 0.000
AMEM007694 Anopheles merus AMEM007694 N 0.000
AMEM002834 Anopheles merus AMEM002834 N 0.000
AMIN009302 Anopheles minimus AMIN009302 N 0.000
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.000
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.000
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.000
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.000
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.000
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.000
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.000
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.000
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.000
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.000
ACEP25851 Atta cephalotes ACEP25851 N 0.000
67303 Aureococcus anophagefferens 67303 N 0.000
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.000
yakG000714 Bos grunniens yakG000714 N 0.000
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.000
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.000
CBN25334 Caenorhabditis brenneri CBN25334 N 0.000
CBN19486 Caenorhabditis brenneri CBN19486 N 0.000
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.000
Aan_R006397 Calypte anna Aan_R006397 N 0.000
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.000
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.000
CLEC006960 Cimex lectularius CLEC006960 N 0.000
orange1.1g036321m.g Citrus sinensis orange1.1g036321m.g N 0.000
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.000
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.000
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.000
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.000
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.000
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.000
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.000
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.000
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.000
GA28914 Drosophila pseudoobscura FBgn0250273 N 0.000
SOX8 Echinops telfairi ENSETEG00000015470 N 0.000
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.000
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.000
EDI_065970 Entamoeba dispar EDI_065970 N 0.000
UCREL1_237 Eutypa lata UCREL1_237 N 0.000
SOX2 Felis catus ENSFCAG00000029205 I 0.000
SOX8 Felis catus ENSFCAG00000004219 N 0.000
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.000
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.000
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.000
M7I_1506 Glarea lozoyensis M7I_1506 N 0.000
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.000
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.000
GLYMA05G25070 Glycine max GLYMA05G25070 N 0.000
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.000
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.000
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.000
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.000
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.000
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.000
ISCW001638 Ixodes scapularis ISCW001638 N 0.000
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.000
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.000
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.000
MESCA006364 Megaselia scalaris MESCA006364 N 0.000
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.000
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.000
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.000
Minc18937 Meloidogyne incognita Minc18937 N 0.000
SOX8 Microcebus murinus ENSMICG00000011516 I 0.000
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.000
Hmg20b Mus musculus ENSMUSG00000020232 D 0.000
Sox17 Mus musculus ENSMUSG00000025902 D 0.000
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.000
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.000
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.000
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.000
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.000
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.000
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.000
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.000
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.000
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.000
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.000
PHUM433280 Pediculus humanus PHUM433280 N 0.000
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.000
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.000
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.000
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.000
F443_09320 Phytophthora parasitica F443_09320 N 0.000
Phyra76615 Phytophthora ramorum Phyra76615 N 0.000
Physo127875 Phytophthora sojae Physo127875 N 0.000
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.000
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.000
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.000
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.000
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.000
PPA11045 Pristionchus pacificus PPA11045 N 0.000
SOX2 Procavia capensis ENSPCAG00000003690 I 0.000
SOX18 Procavia capensis ENSPCAG00000015663 N 0.000
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.000
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.000
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.000
RPRC001038 Rhodnius prolixus RPRC001038 N 0.000
SINV19749 Solenopsis invicta SINV19749 N 0.000
SINV16572 Solenopsis invicta SINV16572 N 0.000
SOX17 Sorex araneus ENSSARG00000009573 I 0.000
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.000
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.000
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.000
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.000
TC009856 Tribolium castaneum TC009856 N 0.000
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.000
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.000
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.000
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.000
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.000
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.000
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.000
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.000
L798_00185 Zootermopsis nevadensis L798_00185 N 0.000
L798_05432 Zootermopsis nevadensis L798_05432 N 0.000
L798_12046 Zootermopsis nevadensis L798_12046 N 0.000