ERF110 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.8__881__AT5G50080.1 T001713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.759 0.837
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.759 0.837
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.759 0.837
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.759 0.837
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.747 0.816
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.747 0.816
ABR1
M01051_2.00
Arabidopsis thaliana
NYGSCGSCVNN

NNBGSCGSCRN
PBM
Sullivan et al.(2014)
pTH7383
0.706 0.898
ABR1
M06684_2.00
Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH

DDNDRNDDHKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ABR1_col_a
0.706 0.898
ABR1
M06685_2.00
Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN

NNNNNDWTKGCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ABR1_colamp_a
0.706 0.898
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.692 0.796
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.691 0.796
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.689 0.816
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.689 0.816
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.689 0.816
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.684 0.755
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.682 0.714
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.8__881__AT5G50080.1 AP2 75 126

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

554 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action