CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA03G31920
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA03G31920
T001765_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB
VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.718
0.833
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.718
0.833
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.718
0.833
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.706
0.833
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.706
0.833
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD
HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.706
0.833
ERF1B
M09703_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.706
0.833
ERF1B
M09704_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.706
0.833
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA03G31920.1
AP2
85
136
RTYRGVRSRPWGKFAAEIRDPTRNGVRVWIGTFVSAEEAALAYDQAAFLTRG
Links
Other
AP2
family TFs
Other
Glycine max
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g052480
Brassica oleracea
Bo4g052480
I
0.719
Bra018271
Brassica rapa
Bra018271
I
0.719
Cagra.6952s0002
Capsella grandiflora
Cagra.6952s0002
I
0.718
ERF15
Arabidopsis thaliana
AT2G31230
D
0.718
Bostr.24513s0101
Boechera stricta
Bostr.24513s0101
I
0.718
Carubv10025229m.g
Capsella rubella
Carubv10025229m.g
I
0.718
ATERF15
Arabidopsis lyrata
fgenesh2_kg.4__1110__AT2G31230.1
I
0.718
Bo4g176080
Brassica oleracea
Bo4g176080
I
0.717
Bra021712
Brassica rapa
Bra021712
I
0.717
Thhalv10017149m.g
Eutrema salsugineum
Thhalv10017149m.g
I
0.717
Lus10006579.g
Linum usitatissimum
Lus10006579.g
I
0.714
Lus10014655.g
Linum usitatissimum
Lus10014655.g
I
0.714
Traes_2AL_0B28B6DBE
Triticum aestivum
Traes_2AL_0B28B6DBE
I
0.713
Gorai.004G220800
Gossypium raimondii
Gorai.004G220800
I
0.712
OLONG_002067
Oryza longistaminata
OLONG_002067
I
0.711
OGLUM03G41640
Oryza glumaepatula
OGLUM03G41640
I
0.711
OMERI03G15490
Oryza meridionalis
OMERI03G15490
I
0.711
ONIVA01G48030
Oryza nivara
ONIVA01G48030
I
0.711
ORUFI03G43580
Oryza rufipogon
ORUFI03G43580
I
0.711
OBART03G41810
Oryza barthii
OBART03G41810
I
0.711
OS03G0860100
Oryza sativa
OS03G0860100
I
0.711
ORGLA03G0387300
Oryza glaberrima
ORGLA03G0387300
I
0.711
BGIOSGA009392
Oryza indica
BGIOSGA009392
I
0.711
Bo3g025110
Brassica oleracea
Bo3g025110
I
0.707
Bra022832
Brassica rapa
Bra022832
I
0.707
Bra023745
Brassica rapa
Bra023745
I
0.706
Bra023746
Brassica rapa
Bra023746
I
0.706
Bo1g102210
Brassica oleracea
Bo1g102210
I
0.706
Thhalv10022374m.g
Eutrema salsugineum
Thhalv10022374m.g
I
0.706
ERF1B
Arabidopsis thaliana
AT3G23240
D
0.706
ERF1
Arabidopsis lyrata
scaffold_302806.1
I
0.706
Carubv10014553m.g
Capsella rubella
Carubv10014553m.g
I
0.705
Cagra.8559s0001
Capsella grandiflora
Cagra.8559s0001
I
0.705
Solyc05g051180.1
Solanum lycopersicum
Solyc05g051180.1
I
0.702
PGSC0003DMG400010285
Solanum tuberosum
PGSC0003DMG400010285
I
0.700
Bostr.19424s0319
Boechera stricta
Bostr.19424s0319
I
0.700
Solyc09g066360.1
Solanum lycopersicum
Solyc09g066360.1
I
0.700
Pm003579
Prunus mume
Pm003579
I
0.696
PRUPE_ppa016384mg
Prunus persica
PRUPE_ppa016384mg
I
0.696
LPERR03G35710
Leersia perrieri
LPERR03G35710
I
0.696
gene16619-v1.0-hybrid
Fragaria vesca
gene16619-v1.0-hybrid
I
0.691
GSMUA_Achr6G04440_001
Musa acuminata
GSMUA_Achr6G04440_001
I
0.691
TCM_029773
Theobroma cacao
TCM_029773
I
0.690
PGSC0003DMG400010750
Solanum tuberosum
PGSC0003DMG400010750
I
0.689
Bra032433
Brassica rapa
Bra032433
I
0.689
Solyc03g093610.1
Solanum lycopersicum
Solyc03g093610.1
I
0.689
Bra015478
Brassica rapa
Bra015478
I
0.687
Thhalv10008518m.g
Eutrema salsugineum
Thhalv10008518m.g
I
0.684
GSMUA_Achr5G24680_001
Musa acuminata
GSMUA_Achr5G24680_001
I
0.683
Bo5g007280
Brassica oleracea
Bo5g007280
I
0.682
MTR_4g054360
Medicago truncatula
MTR_4g054360
I
0.682
Bo8g114710
Brassica oleracea
Bo8g114710
I
0.682
Bostr.25219s0341
Boechera stricta
Bostr.25219s0341
I
0.681
ORA59
Arabidopsis lyrata
fgenesh2_kg.1__587__AT1G06160.1
I
0.681
MTR_4g054740
Medicago truncatula
MTR_4g054740
I
0.681
Carubv10010105m.g
Capsella rubella
Carubv10010105m.g
I
0.681
Cagra.1671s0247
Capsella grandiflora
Cagra.1671s0247
I
0.681
Traes_5BL_FBC7AF288
Triticum aestivum
Traes_5BL_FBC7AF288
I
0.679
Traes_1BL_8E4911A3C
Triticum aestivum
Traes_1BL_8E4911A3C
I
0.679
Gorai.007G046000
Gossypium raimondii
Gorai.007G046000
I
0.678
PK28774.1
Cannabis sativa
PK28774.1
I
0.678
LPERR03G03540
Leersia perrieri
LPERR03G03540
I
0.678
OBART03G03890
Oryza barthii
OBART03G03890
I
0.678
BGIOSGA011868
Oryza indica
BGIOSGA011868
I
0.678
OLONG_008277
Oryza longistaminata
OLONG_008277
I
0.678
ONIVA03G03670
Oryza nivara
ONIVA03G03670
I
0.678
ORGLA03G0036700
Oryza glaberrima
ORGLA03G0036700
I
0.678
OGLUM03G03790
Oryza glumaepatula
OGLUM03G03790
I
0.678
mgf020878m
Mimulus guttatus
mgf020878m
I
0.678
ORUFI03G03630
Oryza rufipogon
ORUFI03G03630
I
0.678
OS03G0150200
Oryza sativa
OS03G0150200
I
0.678
mgf018935m
Mimulus guttatus
mgf018935m
I
0.677