CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA05G03540
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA05G03540
T001787_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA05G03540.2
AP2
14
64
PLYHGIRCRGGKWVTEIREPRKTNRIWLGTFLTPEMAAAAYDVAALALKGG
Links
Other
AP2
family TFs
Other
Glycine max
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA17G14100
Glycine max
GLYMA17G14100
N
0.793
PRUPE_ppa022712mg
Prunus persica
PRUPE_ppa022712mg
N
0.704
Pm023768
Prunus mume
Pm023768
N
0.704
PRUPE_ppa021384mg
Prunus persica
PRUPE_ppa021384mg
N
0.701
Pm023767
Prunus mume
Pm023767
N
0.701
Thhalv10023678m.g
Eutrema salsugineum
Thhalv10023678m.g
I
0.696
POPTR_0001s08740
Populus trichocarpa
POPTR_0001s08740
N
0.693
SapurV1A.0282s0060
Salix purpurea
SapurV1A.0282s0060
N
0.692
Ca_08733
Cicer arietinum
Ca_08733
N
0.688
Pm023766
Prunus mume
Pm023766
I
0.685
MTR_4g102670
Medicago truncatula
MTR_4g102670
N
0.685
PRUPE_ppa026499mg
Prunus persica
PRUPE_ppa026499mg
I
0.685
chr2.CM0304.660.nd
Lotus japonicus
chr2.CM0304.660.nd
N
0.683
Cucsa.041590
Cucumis sativus
Cucsa.041590
N
0.681
GLYMA01G42510
Glycine max
GLYMA01G42510
N
0.681