GLYMA07G19221 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA07G19221 T001835_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.728 0.811
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.728 0.811
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.688 0.811
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G19221.1 AP2 75 133
GLYMA07G19221.2 AP2 74 132

Links

Other AP2 family TFs
Other Glycine max TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.820
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.816
29820.m001008 Ricinus communis 29820.m001008 I 0.752
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.752
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.746
TCM_021596 Theobroma cacao TCM_021596 I 0.734
DREB2A Arabidopsis thaliana AT5G05410 D 0.728
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.726
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.726
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.726
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.726
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.724
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.721
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.721
Bra028759 Brassica rapa Bra028759 I 0.713
Bo2g006960 Brassica oleracea Bo2g006960 I 0.713
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.706
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.706
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.705
Bra005852 Brassica rapa Bra005852 I 0.705
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.704
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.703
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.701
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.698
Bo1g141310 Brassica oleracea Bo1g141310 I 0.694
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.691
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.691
PK07402.1 Cannabis sativa PK07402.1 D 0.688
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.687
Bra034159 Brassica rapa Bra034159 I 0.684
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.682
PK07829.1 Cannabis sativa PK07829.1 I 0.681
Bra001386 Brassica rapa Bra001386 I 0.677