GLYMA08G15830 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA08G15830 T001847_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.694 0.706
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.691 0.627
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.691 0.627
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.691 0.627
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G15830.2 AP2 75 126

Links

Other AP2 family TFs
Other Glycine max TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.774
PGSC0003DMG400014541 Solanum tuberosum PGSC0003DMG400014541 I 0.740
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.730
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.706
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.704
GLYMA17G18610 Glycine max GLYMA17G18610 N 0.703
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.702
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.702
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.702
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.697
PK24580.1 Cannabis sativa PK24580.1 D 0.694
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.693
Cla021763 Citrullus lanatus Cla021763 I 0.692
TCM_011811 Theobroma cacao TCM_011811 I 0.691
ERF118 Arabidopsis thaliana AT1G68550 D 0.691
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.691
Cla008128 Citrullus lanatus Cla008128 I 0.690
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.690
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.683
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.679
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.679