GLYMA09G27180 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA09G27180 T001867_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.792 0.920
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.792 0.920
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.792 0.920
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.792 0.920
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.781 0.900
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.781 0.900
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.760 0.880
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.760 0.880
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.760 0.880
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.739 0.800
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.739 0.800
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.739 0.800
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.739 0.800
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.739 0.800
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.739 0.800
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.723 0.800
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.723 0.800
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.711 0.760
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.690 0.820
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.679 0.860
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.679 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA09G27180.2 AP2 156 207

Links

Other AP2 family TFs
Other Glycine max TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf026642m Mimulus guttatus mgf026642m I 0.821
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.818
PK23332.1 Cannabis sativa PK23332.1 I 0.818
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.813
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.813
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.813
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.810
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.807
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.806
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.806
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.805
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.804
Cla011674 Citrullus lanatus Cla011674 I 0.803
Cla006315 Citrullus lanatus Cla006315 I 0.802
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.801
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.800
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.799
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.796
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.796
mgf017136m Mimulus guttatus mgf017136m I 0.795
DREB1A Arabidopsis thaliana AT4G25480 D 0.792
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.791
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.791
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.791
MDP0000154764 Malus domestica MDP0000154764 I 0.791
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.791
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.790
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.790
Pm023775 Prunus mume Pm023775 I 0.788
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.788
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.788
30147.m014313 Ricinus communis 30147.m014313 I 0.787
Cla002362 Citrullus lanatus Cla002362 I 0.786
TCM_016175 Theobroma cacao TCM_016175 I 0.786
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.785
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.785
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.784
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.782
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.781
DREB1D Arabidopsis thaliana AT5G51990 D 0.781
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.781
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.781
Bo9g104770 Brassica oleracea Bo9g104770 I 0.781
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.781
Bra028290 Brassica rapa Bra028290 I 0.781
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.781
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.780
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.780
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.780
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.780
mgf019061m Mimulus guttatus mgf019061m I 0.779
MDP0000198054 Malus domestica MDP0000198054 I 0.779
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.778
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.778
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.778
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.777
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.775
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.775
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.773
Pm023769 Prunus mume Pm023769 I 0.773
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.772
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.767
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.766
30190.m011120 Ricinus communis 30190.m011120 I 0.765
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.764
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.764
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.764
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.763
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.761
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.761
DREB1C Arabidopsis thaliana AT4G25470 D 0.760
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.758
Pm023772 Prunus mume Pm023772 I 0.758
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.758
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.757
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.757
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.753
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.753
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.752
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.750
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.750
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.750
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.749
60638.m00016 Ricinus communis 60638.m00016 I 0.749
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.748
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.748
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.748
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.748
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.748
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.747
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.746
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.745
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.745
Bo01335s010 Brassica oleracea Bo01335s010 I 0.744
Bra016763 Brassica rapa Bra016763 I 0.744
Bo8g108050 Brassica oleracea Bo8g108050 I 0.743
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.743
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.743
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.743
30190.m011119 Ricinus communis 30190.m011119 I 0.743
Bra026963 Brassica rapa Bra026963 I 0.743
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.742
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.742
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.742
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.739
DREB1F Arabidopsis thaliana AT1G12610 D 0.739
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.736
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.735
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.734
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.734
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.734
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.732
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.732
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.732
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.729
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.728
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.728
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.727
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.726
Pm019386 Prunus mume Pm019386 I 0.725
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.725
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.724
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.723
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.723
DREB1G Oryza indica BGIOSGA008804 I 0.723
DREB1G Oryza sativa OS02G0677300 D 0.723
OBART02G27760 Oryza barthii OBART02G27760 I 0.723
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.723
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.723
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.723
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.723
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.723
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.723
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.723
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.723
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.722
mgf026339m Mimulus guttatus mgf026339m I 0.722
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.721
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.721
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.718
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.716
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.716
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.715
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.715
Ca_04504 Cicer arietinum Ca_04504 I 0.715
Si018262m.g Setaria italica Si018262m.g I 0.713
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.713
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.711
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.711
mgf022408m Mimulus guttatus mgf022408m I 0.711
mgf018934m Mimulus guttatus mgf018934m I 0.711
mgf016974m Mimulus guttatus mgf016974m I 0.711
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.711
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.711
mgf018631m Mimulus guttatus mgf018631m I 0.711
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.709
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.708
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.706
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.703
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.703
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.703
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.703
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.703
Bo5g016750 Brassica oleracea Bo5g016750 I 0.703
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.701
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.699
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.699
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.698
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.697
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.697
Ca_18948 Cicer arietinum Ca_18948 I 0.696
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.695
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.695
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.695
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.695
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.693
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.693
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.693
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.692
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.692
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.692
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.692
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.692
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.692
Bra019777 Brassica rapa Bra019777 I 0.691
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.690
DREB1E Oryza indica BGIOSGA016950 I 0.690
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.690
DREB1E Oryza sativa OS04G0572400 D 0.690
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.690
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.690
OBART04G22220 Oryza barthii OBART04G22220 I 0.690
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.690
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.690
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.690
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.690
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.690
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.689
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.687
Ca_08732 Cicer arietinum Ca_08732 I 0.686
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.685
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.683
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.683
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.683
Bra019162 Brassica rapa Bra019162 I 0.679
Bo7g110320 Brassica oleracea Bo7g110320 I 0.679
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.679
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.679