CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA10G07005
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA10G07005
T001881_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.691
0.820
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.684
0.780
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD
HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.684
0.780
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.680
0.820
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.680
0.820
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA10G07005.1
AP2
21
72
VHFRGVRKRPWGRYASKIRDPSQKSRVWLGTFDTAEATARAYDAAAREFRGP
Links
Other
AP2
family TFs
Other
Glycine max
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G38171
Glycine max
GLYMA08G38171
I
0.832
GLYMA07G23225
Glycine max
GLYMA07G23225
I
0.787
Gorai.005G200200
Gossypium raimondii
Gorai.005G200200
I
0.703
mgf019214m
Mimulus guttatus
mgf019214m
I
0.703
GLYMA13G30990
Glycine max
GLYMA13G30990
I
0.703
Bra021594
Brassica rapa
Bra021594
I
0.701
GSMUA_Achr8G03550_001
Musa acuminata
GSMUA_Achr8G03550_001
I
0.701
TCM_008162
Theobroma cacao
TCM_008162
I
0.700
Solyc07g053740.1
Solanum lycopersicum
Solyc07g053740.1
I
0.700
Ca_11261
Cicer arietinum
Ca_11261
I
0.696
evm.TU.supercontig_27.16
Carica papaya
evm.TU.supercontig_27.16
I
0.695
POPTR_0011s05580
Populus trichocarpa
POPTR_0011s05580
I
0.695
cassava20937.m1
Manihot esculenta
cassava20937.m1
I
0.695
orange1.1g026240m.g
Citrus sinensis
orange1.1g026240m.g
I
0.695
Lus10015415.g
Linum usitatissimum
Lus10015415.g
I
0.695
30190.m011321
Ricinus communis
30190.m011321
I
0.695
chr6.CM0114.120.nc
Lotus japonicus
chr6.CM0114.120.nc
I
0.695
Aquca_036_00070
Aquilegia coerulea
Aquca_036_00070
I
0.695
Ciclev10016276m.g
Citrus clementina
Ciclev10016276m.g
I
0.695
Ciclev10016463m.g
Citrus clementina
Ciclev10016463m.g
I
0.695
Gorai.006G088000
Gossypium raimondii
Gorai.006G088000
I
0.695
gene29738-v1.0-hybrid
Fragaria vesca
gene29738-v1.0-hybrid
I
0.695
GLYMA15G08370
Glycine max
GLYMA15G08370
I
0.695
Gorai.010G155900
Gossypium raimondii
Gorai.010G155900
I
0.695
ERF4_TOBAC
Nicotiana tabacum
ERF4_TOBAC
D
0.691
OS01G0797600
Oryza sativa
OS01G0797600
I
0.691
ORGLA01G0278100
Oryza glaberrima
ORGLA01G0278100
I
0.691
OPUNC01G32930
Oryza punctata
OPUNC01G32930
I
0.691
PGSC0003DMG400026821
Solanum tuberosum
PGSC0003DMG400026821
I
0.691
Pavir.Eb03458
Panicum virgatum
Pavir.Eb03458
I
0.691
ONIVA01G38670
Oryza nivara
ONIVA01G38670
I
0.691
Si002729m.g
Setaria italica
Si002729m.g
I
0.691
Pavir.Ea03147
Panicum virgatum
Pavir.Ea03147
I
0.691
Gorai.011G029800
Gossypium raimondii
Gorai.011G029800
I
0.691
ORUFI01G37120
Oryza rufipogon
ORUFI01G37120
I
0.691
Bo1g129710
Brassica oleracea
Bo1g129710
I
0.691
OGLUM01G38110
Oryza glumaepatula
OGLUM01G38110
I
0.691
OBART01G33870
Oryza barthii
OBART01G33870
I
0.691
OLONG_021733
Oryza longistaminata
OLONG_021733
I
0.691
LPERR01G29260
Leersia perrieri
LPERR01G29260
I
0.691
BGIOSGA004611
Oryza indica
BGIOSGA004611
I
0.691
OMERI01G30710
Oryza meridionalis
OMERI01G30710
I
0.691
Pavir.Gb00545
Panicum virgatum
Pavir.Gb00545
I
0.690
OB01G42720
Oryza brachyantha
OB01G42720
I
0.690
evm.TU.supercontig_83.80
Carica papaya
evm.TU.supercontig_83.80
I
0.689
VIT_12s0028g03270
Vitis vinifera
VIT_12s0028g03270
I
0.688
MTR_2g014340
Medicago truncatula
MTR_2g014340
I
0.688
Cla020000
Citrullus lanatus
Cla020000
I
0.688
Sb03g037080
Sorghum bicolor
Sb03g037080
I
0.687
TCM_029820
Theobroma cacao
TCM_029820
I
0.686
GSMUA_Achr4G33270_001
Musa acuminata
GSMUA_Achr4G33270_001
I
0.686
POPTR_0004s04720
Populus trichocarpa
POPTR_0004s04720
I
0.686
SapurV1A.0012s0580
Salix purpurea
SapurV1A.0012s0580
I
0.686
PK02602.1
Cannabis sativa
PK02602.1
I
0.686
cassava1589.valid.m1
Manihot esculenta
cassava1589.valid.m1
I
0.686
GSMUA_Achr6G00250_001
Musa acuminata
GSMUA_Achr6G00250_001
I
0.686
VIT_10s0003g00140
Vitis vinifera
VIT_10s0003g00140
I
0.685
Cucsa.126880
Cucumis sativus
Cucsa.126880
I
0.685
SapurV1A.3143s0020
Salix purpurea
SapurV1A.3143s0020
I
0.684
PK19363.1
Cannabis sativa
PK19363.1
D
0.684
SapurV1A.0032s0470
Salix purpurea
SapurV1A.0032s0470
I
0.684
Sb09g024400
Sorghum bicolor
Sb09g024400
I
0.684
GSMUA_Achr4G23620_001
Musa acuminata
GSMUA_Achr4G23620_001
I
0.684
BGIOSGA017796
Oryza indica
BGIOSGA017796
I
0.683
Bo5g004090
Brassica oleracea
Bo5g004090
I
0.683
Bra015266
Brassica rapa
Bra015266
I
0.683
29983.m003147
Ricinus communis
29983.m003147
I
0.683
cassava46560.m1
Manihot esculenta
cassava46560.m1
I
0.683
LPERR05G17480
Leersia perrieri
LPERR05G17480
I
0.683
ORUFI05G22850
Oryza rufipogon
ORUFI05G22850
I
0.683
OS05G0497300
Oryza sativa
OS05G0497300
I
0.683
OGLUM05G22790
Oryza glumaepatula
OGLUM05G22790
I
0.683
ORGLA05G0187600
Oryza glaberrima
ORGLA05G0187600
I
0.683
ONIVA05G22270
Oryza nivara
ONIVA05G22270
I
0.683
OPUNC05G19230
Oryza punctata
OPUNC05G19230
I
0.683
PGSC0003DMG400013744
Solanum tuberosum
PGSC0003DMG400013744
I
0.683
OBART05G21580
Oryza barthii
OBART05G21580
I
0.683
MLOC_24530
Hordeum vulgare
MLOC_24530
I
0.683
OMERI05G19490
Oryza meridionalis
OMERI05G19490
I
0.683
TRAES3BF075600050CFD_g
Triticum aestivum
TRAES3BF075600050CFD_g
I
0.683
Si023088m.g
Setaria italica
Si023088m.g
I
0.683
MTR_4g078710
Medicago truncatula
MTR_4g078710
I
0.683
Pavir.Ca01358
Panicum virgatum
Pavir.Ca01358
I
0.682
Pavir.J14354
Panicum virgatum
Pavir.J14354
I
0.682
Q84LQ6_SOLLC
Solanum lycopersicum
Q84LQ6_SOLLC
I
0.682
Q84XB1_SOLLC
Solanum lycopersicum
Q84XB1_SOLLC
I
0.682
Solyc10g009110.1
Solanum lycopersicum
Solyc10g009110.1
I
0.682
Cucsa.046390
Cucumis sativus
Cucsa.046390
I
0.682
PRUPE_ppa010090mg
Prunus persica
PRUPE_ppa010090mg
I
0.681
GRMZM2G310368
Zea mays
GRMZM2G310368
I
0.681
BRADI2G21060
Brachypodium distachyon
BRADI2G21060
I
0.680
ERF9
Arabidopsis lyrata
fgenesh2_kg.8__388__AT5G44210.1
I
0.680
MLOC_73358
Hordeum vulgare
MLOC_73358
I
0.680
ERF9
Arabidopsis thaliana
AT5G44210
D
0.680
Bostr.3148s0037
Boechera stricta
Bostr.3148s0037
I
0.680
GRMZM2G132185
Zea mays
GRMZM2G132185
I
0.679
Ca_00327
Cicer arietinum
Ca_00327
I
0.679
Cagra.0381s0006
Capsella grandiflora
Cagra.0381s0006
I
0.678
BRADI2G52370
Brachypodium distachyon
BRADI2G52370
I
0.678
GSMUA_Achr9G11480_001
Musa acuminata
GSMUA_Achr9G11480_001
I
0.678
PGSC0003DMG400022823
Solanum tuberosum
PGSC0003DMG400022823
I
0.678
Cla002268
Citrullus lanatus
Cla002268
I
0.678
Carubv10027246m.g
Capsella rubella
Carubv10027246m.g
I
0.678
Cucsa.195660
Cucumis sativus
Cucsa.195660
I
0.678