GLYMA10G31440 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA10G31440 T001888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.797 0.762
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.797 0.762
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.778 0.752
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.778 0.752
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.776 0.800
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.776 0.800
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.775 0.743
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.775 0.743
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G31440.1 AP2 196 253
GLYMA10G31440.1 AP2 296 348

Links

Other AP2 family TFs
Other Glycine max TFs

532 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.000
BGIOSGA016949 Oryza indica BGIOSGA016949 N 0.000
Pavir.Ga00932 Panicum virgatum Pavir.Ga00932 N 0.000
Si011086m.g Setaria italica Si011086m.g N 0.000
Sb06g025890 Sorghum bicolor Sb06g025890 N 0.000
OS04G0572200 Oryza sativa OS04G0572200 N 0.000
ORUFI04G23880 Oryza rufipogon ORUFI04G23880 N 0.000
OPUNC04G19950 Oryza punctata OPUNC04G19950 N 0.000
ONIVA04G20830 Oryza nivara ONIVA04G20830 N 0.000
OMERI04G18760 Oryza meridionalis OMERI04G18760 N 0.000
OGLUM04G22250 Oryza glumaepatula OGLUM04G22250 N 0.000
OBART04G22210 Oryza barthii OBART04G22210 N 0.000
LPERR04G18180 Leersia perrieri LPERR04G18180 N 0.000
GRMZM2G368838 Zea mays GRMZM2G368838 N 0.000
Pavir.Ga01110 Panicum virgatum Pavir.Ga01110 N 0.000