GLYMA10G38420 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA10G38420 T001896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.698 0.875
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G38420.1 AP2 44 93

Links

Other AP2 family TFs
Other Glycine max TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.704
TCM_016176 Theobroma cacao TCM_016176 I 0.704
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.704
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.701
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.701
Cla011673 Citrullus lanatus Cla011673 I 0.699
Cla004491 Citrullus lanatus Cla004491 I 0.698
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.698
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.694
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.691
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.691
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.691
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.691
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.690
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.686
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.683
30147.m014311 Ricinus communis 30147.m014311 I 0.681
MDP0000189347 Malus domestica MDP0000189347 I 0.678