GLYMA10G38440 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA10G38440 T001897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.748 0.940
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.748 0.940
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.744 0.920
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.744 0.920
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.744 0.920
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.744 0.920
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.709 0.860
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.709 0.860
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.709 0.860
DREB1E
M00963_2.00
Arabidopsis thaliana
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_thaliana
0.698 0.740
DREB1E
M06589_2.00
Arabidopsis thaliana
NNNYYGYCGACATVD

HBATGTCGRCRRNNN
Dap-seq
OMalley et al.(2016)
DDF2_col_a
0.698 0.740
DREB1E
M09702_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1E_03
0.698 0.740
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.686 0.820
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.686 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G38440.1 AP2 55 106

Links

Other AP2 family TFs
Other Glycine max TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m014313 Ricinus communis 30147.m014313 I 0.753
30190.m011119 Ricinus communis 30190.m011119 I 0.694
30190.m011120 Ricinus communis 30190.m011120 I 0.705
60638.m00016 Ricinus communis 60638.m00016 I 0.700
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.690
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.683
DREB1E Arabidopsis thaliana AT1G63030 D 0.698
DREB1C Arabidopsis thaliana AT4G25470 D 0.709
DREB1A Arabidopsis thaliana AT4G25480 D 0.744
DREB1D Arabidopsis thaliana AT5G51990 D 0.748
DREB1G Oryza indica BGIOSGA008804 I 0.686
Bo01335s010 Brassica oleracea Bo01335s010 I 0.679
Bo9g104770 Brassica oleracea Bo9g104770 I 0.748
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.748
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.744
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.770
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.744
Bra016763 Brassica rapa Bra016763 I 0.679
Bra028290 Brassica rapa Bra028290 I 0.748
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.691
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.748
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.773
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.744
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.744
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.721
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.748
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.678
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.751
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.779
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.736
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.694
Ca_02407 Cicer arietinum Ca_02407 N 0.693
Ca_03665 Cicer arietinum Ca_03665 N 0.691
Ca_04504 Cicer arietinum Ca_04504 I 0.783
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.832
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.695
Cla002362 Citrullus lanatus Cla002362 I 0.735
Cla006315 Citrullus lanatus Cla006315 I 0.766
Cla011674 Citrullus lanatus Cla011674 I 0.729
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.713
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.768
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.704
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.767
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.789
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.778
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.785
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.789
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.754
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.789
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.779
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.748
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.783
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.789
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.779
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.751
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.738
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.727
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.737
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.767
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.737
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.753
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.700
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.685
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.832
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.727
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.779
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.722
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.686
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.724
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.681
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.702
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.695
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.685
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.686
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.709
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.712
MDP0000154764 Malus domestica MDP0000154764 I 0.731
MDP0000198054 Malus domestica MDP0000198054 I 0.730
mgf016974m Mimulus guttatus mgf016974m I 0.783
mgf017136m Mimulus guttatus mgf017136m I 0.730
mgf017477m Mimulus guttatus mgf017477m N 0.740
mgf018631m Mimulus guttatus mgf018631m I 0.783
mgf018934m Mimulus guttatus mgf018934m I 0.783
mgf019061m Mimulus guttatus mgf019061m I 0.714
mgf022408m Mimulus guttatus mgf022408m I 0.783
mgf026339m Mimulus guttatus mgf026339m I 0.689
mgf026642m Mimulus guttatus mgf026642m I 0.773
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.691
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.805
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.678
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.678
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.691
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.687
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.687
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.715
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.682
OBART02G27760 Oryza barthii OBART02G27760 I 0.686
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.686
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.686
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.686
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.686
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.832
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.696
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.686
DREB1G Oryza sativa OS02G0677300 D 0.686
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.686
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.686
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.680
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.699
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.750
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.731
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.728
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.724
PK23332.1 Cannabis sativa PK23332.1 I 0.767
Pm023769 Prunus mume Pm023769 I 0.713
Pm023772 Prunus mume Pm023772 I 0.705
Pm023775 Prunus mume Pm023775 I 0.728
Pm023777 Prunus mume Pm023777 N 0.719
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.714
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.696
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.694
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.779
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.773
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.728
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.717
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.754
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.762
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.713
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.693
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.758
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.694
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.696
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.693
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.757
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.686
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.748
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.745
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.743
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.740
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.759
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.712
TCM_016175 Theobroma cacao TCM_016175 I 0.712
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.748
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.770
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.726
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.744