GLYMA12G30710 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA12G30710 T001920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.684 0.816
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.684 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G30710.1 AP2 62 112

Links

Other AP2 family TFs
Other Glycine max TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.736
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.706
AMTR_s00040p00195730 Amborella trichopoda AMTR_s00040p00195730 I 0.692
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.688
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.687
Cla002362 Citrullus lanatus Cla002362 I 0.686
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.684
DREB1D Arabidopsis thaliana AT5G51990 D 0.684
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.684
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.684
Bo9g104770 Brassica oleracea Bo9g104770 I 0.684
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.684
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.684
Bra028290 Brassica rapa Bra028290 I 0.684
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.684
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.681