GLYMA13G17250 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA13G17250 T001930_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.781 0.860
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.781 0.860
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.776 0.860
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.776 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G17250.1 AP2 17 68

Links

Other AP2 family TFs
Other Glycine max TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.830
Ca_09124 Cicer arietinum Ca_09124 I 0.796
Bra015882 Brassica rapa Bra015882 I 0.786
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.786
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.785
Bra031069 Brassica rapa Bra031069 I 0.784
Bo8g102870 Brassica oleracea Bo8g102870 I 0.784
mgf024162m Mimulus guttatus mgf024162m I 0.783
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.783
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.783
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.783
TCM_037486 Theobroma cacao TCM_037486 I 0.783
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.782
Bo6g119120 Brassica oleracea Bo6g119120 I 0.782
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.781
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.781
ERF018 Arabidopsis thaliana AT1G74930 D 0.781
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.780
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.780
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.779
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.779
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.779
mgf021940m Mimulus guttatus mgf021940m I 0.779
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.778
MDP0000704216 Malus domestica MDP0000704216 I 0.778
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.778
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.777
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.776
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.776
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.776
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.776
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.776
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.776
ERF017 Arabidopsis thaliana AT1G19210 D 0.776
29739.m003716 Ricinus communis 29739.m003716 I 0.775
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.775
Pm027117 Prunus mume Pm027117 I 0.775
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.774
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.774
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.774
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.774
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.773
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.773
Bo6g086740 Brassica oleracea Bo6g086740 I 0.773
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.773
Bra003780 Brassica rapa Bra003780 I 0.773
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.773
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.773
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.772
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.772
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.771
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.771
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.771
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.771
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.769
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.769
mgf025452m Mimulus guttatus mgf025452m I 0.768
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.767
Ca_01683 Cicer arietinum Ca_01683 I 0.767
MDP0000649022 Malus domestica MDP0000649022 I 0.766
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.766
TCM_037415 Theobroma cacao TCM_037415 I 0.766
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.765
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.764
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.764
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.764
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.764
Bo8g068370 Brassica oleracea Bo8g068370 I 0.760
Bra016518 Brassica rapa Bra016518 I 0.760
Ca_19295 Cicer arietinum Ca_19295 I 0.760
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.760
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.760
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.759
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.758
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.758
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.758
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.758
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.758
Ca_19296 Cicer arietinum Ca_19296 I 0.755
Cla011318 Citrullus lanatus Cla011318 I 0.754
Cla007584 Citrullus lanatus Cla007584 I 0.754
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.754
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.752
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.750
Bra025719 Brassica rapa Bra025719 I 0.749
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.746
Ca_19297 Cicer arietinum Ca_19297 I 0.744
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.743
29739.m003647 Ricinus communis 29739.m003647 I 0.743
Si019636m.g Setaria italica Si019636m.g I 0.742
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.742
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.742
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.737
Bo2g023630 Brassica oleracea Bo2g023630 I 0.733
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.733
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.733
Bra020162 Brassica rapa Bra020162 I 0.731
PK18548.1 Cannabis sativa PK18548.1 I 0.727
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.725
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.724
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.719
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.719
Bra006599 Brassica rapa Bra006599 I 0.718
Bo3g015600 Brassica oleracea Bo3g015600 I 0.718
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.717
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.717
Bo9g149820 Brassica oleracea Bo9g149820 I 0.717
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.717
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.717
Bra002377 Brassica rapa Bra002377 I 0.717
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.716
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.714
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.714
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.714
ERF016 Arabidopsis thaliana AT5G21960 I 0.713
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.712
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.712
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.711
Si008104m.g Setaria italica Si008104m.g I 0.711
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.707
Cla022291 Citrullus lanatus Cla022291 I 0.707
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.697
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.697
OS02G0781300 Oryza sativa OS02G0781300 I 0.697
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.697
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.697
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.697
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.697
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.697
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.695
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.689
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.682
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.679