GLYMA14G38610 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA14G38610 T001969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.702 0.720
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.696 0.720
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.696 0.720
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.696 0.720
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.690 0.800
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.684 0.720
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.682 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA14G38610.1 AP2 124 175

Links

Other AP2 family TFs
Other Glycine max TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
O65242_TOBAC Nicotiana tabacum O65242_TOBAC D 0.690
CRF2 Arabidopsis thaliana AT4G23750 D 0.688
CRF4 Arabidopsis thaliana AT4G27950 D 0.696
CRF3 Arabidopsis thaliana AT5G53290 D 0.702
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.682
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.698
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.688
Cagra.1225s0103 Capsella grandiflora Cagra.1225s0103 I 0.696
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.697
Cagra.0084s0074 Capsella grandiflora Cagra.0084s0074 I 0.702
Bostr.7867s0626 Boechera stricta Bostr.7867s0626 I 0.703
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.688
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.713
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.688
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.722
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.715
Ciclev10021073m.g Citrus clementina Ciclev10021073m.g I 0.682
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.722
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I 0.709
Carubv10026682m.g Capsella rubella Carubv10026682m.g I 0.702
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.697
Carubv10005229m.g Capsella rubella Carubv10005229m.g I 0.696
Bostr.26833s0952 Boechera stricta Bostr.26833s0952 I 0.702
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.712
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.691
Pm019793 Prunus mume Pm019793 I 0.710
28641.m000082 Ricinus communis 28641.m000082 I 0.752
30169.m006542 Ricinus communis 30169.m006542 I 0.722
cassava12291.valid.m1 Manihot esculenta cassava12291.valid.m1 I 0.682
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.751
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.714
cassava39307.m1 Manihot esculenta cassava39307.m1 I 0.682
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.722
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.712
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.696
Cucsa.118840 Cucumis sativus Cucsa.118840 I 0.682
Cucsa.303720 Cucumis sativus Cucsa.303720 I 0.682
mgf018116m Mimulus guttatus mgf018116m I 0.722
mgf021650m Mimulus guttatus mgf021650m I 0.687
mgf022434m Mimulus guttatus mgf022434m I 0.702
mgf023807m Mimulus guttatus mgf023807m I 0.699
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.724
Pm024096 Prunus mume Pm024096 I 0.682
evm.TU.supercontig_122.27 Carica papaya evm.TU.supercontig_122.27 I 0.682
evm.TU.supercontig_2.277 Carica papaya evm.TU.supercontig_2.277 I 0.685
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I 0.709
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.722
Pavir.Fa00656 Panicum virgatum Pavir.Fa00656 I 0.682
SapurV1A.0013s0740 Salix purpurea SapurV1A.0013s0740 I 0.680
SapurV1A.0215s0310 Salix purpurea SapurV1A.0215s0310 I 0.707
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.728
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.714
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.752
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.714
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.714
SapurV1A.4828s0010 Salix purpurea SapurV1A.4828s0010 I 0.707
Thhalv10013898m.g Eutrema salsugineum Thhalv10013898m.g I 0.702
Thhalv10025693m.g Eutrema salsugineum Thhalv10025693m.g I 0.689
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.712
PK16787.1 Cannabis sativa PK16787.1 I 0.682
PK28823.1 Cannabis sativa PK28823.1 I 0.722
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.701
orange1.1g036154m.g Citrus sinensis orange1.1g036154m.g I 0.682
MDP0000854039 Malus domestica MDP0000854039 I 0.730
MDP0000783818 Malus domestica MDP0000783818 I 0.685
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.716
gene18922-v1.0-hybrid Fragaria vesca gene18922-v1.0-hybrid I 0.681
gene28067-v1.0-hybrid Fragaria vesca gene28067-v1.0-hybrid I 0.687
Gorai.001G156900 Gossypium raimondii Gorai.001G156900 I 0.699
Gorai.004G135700 Gossypium raimondii Gorai.004G135700 I 0.682
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.722
Gorai.006G208200 Gossypium raimondii Gorai.006G208200 I 0.694
Gorai.007G105600 Gossypium raimondii Gorai.007G105600 I 0.702
Gorai.007G105700 Gossypium raimondii Gorai.007G105700 I 0.705
Gorai.008G252300 Gossypium raimondii Gorai.008G252300 I 0.682
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.722
Gorai.009G355700 Gossypium raimondii Gorai.009G355700 I 0.724
Lus10027573.g Linum usitatissimum Lus10027573.g I 0.704
Lus10039324.g Linum usitatissimum Lus10039324.g I 0.704
MDP0000190504 Malus domestica MDP0000190504 I 0.710
MDP0000229285 Malus domestica MDP0000229285 I 0.685
MDP0000308379 Malus domestica MDP0000308379 I 0.730
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.685
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.712
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.722
GLYMA16G08683 Glycine max GLYMA16G08683 I 0.679
GLYMA19G44240 Glycine max GLYMA19G44240 I 0.685
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I 0.681
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I 0.692
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.710
OB08G25030 Oryza brachyantha OB08G25030 I 0.682
OBART03G38710 Oryza barthii OBART03G38710 I 0.686
OGLUM03G38530 Oryza glumaepatula OGLUM03G38530 I 0.686
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.682
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.682
OMERI03G35630 Oryza meridionalis OMERI03G35630 I 0.686
ONIVA03G40360 Oryza nivara ONIVA03G40360 I 0.686
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.682
OPUNC03G35790 Oryza punctata OPUNC03G35790 I 0.683
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.682
ORGLA03G0354400 Oryza glaberrima ORGLA03G0354400 I 0.686
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.704
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.714
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.714
CRF1 Arabidopsis thaliana AT4G11140 I 0.714
BGIOSGA009571 Oryza indica BGIOSGA009571 I 0.686
Bo2g045930 Brassica oleracea Bo2g045930 I 0.702
Bo3g022760 Brassica oleracea Bo3g022760 I 0.685
Bo3g045150 Brassica oleracea Bo3g045150 I 0.712
Bo6g077880 Brassica oleracea Bo6g077880 I 0.701
Bo9g111050 Brassica oleracea Bo9g111050 I 0.702
Bra003068 Brassica rapa Bra003068 I 0.702
Bra003462 Brassica rapa Bra003462 I 0.701
Bra022643 Brassica rapa Bra022643 I 0.702
Bra029079 Brassica rapa Bra029079 I 0.685
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.679
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.714
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.688
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.714
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.766
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.709
ORUFI03G40350 Oryza rufipogon ORUFI03G40350 I 0.686
Pm013049 Prunus mume Pm013049 I 0.680
TCM_042300 Theobroma cacao TCM_042300 I 0.708
TCM_032408 Theobroma cacao TCM_032408 I 0.724
TCM_016396 Theobroma cacao TCM_016396 I 0.682
TCM_015336 Theobroma cacao TCM_015336 I 0.722
TCM_005203 Theobroma cacao TCM_005203 I 0.705
Solyc08g081960.1 Solanum lycopersicum Solyc08g081960.1 I 0.682
Solyc06g082590.1 Solanum lycopersicum Solyc06g082590.1 I 0.698
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.722
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.731
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.722
Pm000232 Prunus mume Pm000232 I 0.715
Cla013632 Citrullus lanatus Cla013632 I 0.724
Cla011573 Citrullus lanatus Cla011573 I 0.682
Cla011108 Citrullus lanatus Cla011108 I 0.696
Cla004992 Citrullus lanatus Cla004992 I 0.677
Cla004291 Citrullus lanatus Cla004291 I 0.712
Ca_15671 Cicer arietinum Ca_15671 I 0.720
Ca_03948 Cicer arietinum Ca_03948 I 0.710
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.722
Si014237m.g Setaria italica Si014237m.g I 0.679
POPTR_0014s09020 Populus trichocarpa POPTR_0014s09020 I 0.683
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.722
POPTR_0001s10300 Populus trichocarpa POPTR_0001s10300 I 0.682
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.722
PGSC0003DMG400030472 Solanum tuberosum PGSC0003DMG400030472 I 0.697
PGSC0003DMG400012305 Solanum tuberosum PGSC0003DMG400012305 I 0.682
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.722
OS08G0474000 Oryza sativa OS08G0474000 I 0.682
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.728
POPTR_0019s15190 Populus trichocarpa POPTR_0019s15190 I 0.727
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.710
CRF3 Arabidopsis lyrata scaffold_801806.1 I 0.702
CRF4 Arabidopsis lyrata scaffold_701473.1 I 0.697
PRUPE_ppa025804mg Prunus persica PRUPE_ppa025804mg I 0.682
PRUPE_ppa025495mg Prunus persica PRUPE_ppa025495mg I 0.715
PRUPE_ppa022995mg Prunus persica PRUPE_ppa022995mg I 0.715
OS03G0815800 Oryza sativa OS03G0815800 I 0.686
Lus10018756.g Linum usitatissimum Lus10018756.g N 0.722
PRUPE_ppa018978mg Prunus persica PRUPE_ppa018978mg N 0.678
BRADI1G04110 Brachypodium distachyon BRADI1G04110 N 0.695