GLYMA16G32330 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA16G32330 T001998_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.696 0.880
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.696 0.880
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.679 0.880
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.679 0.880
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.679 0.880
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.679 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G32330.1 AP2 63 114

Links

Other AP2 family TFs
Other Glycine max TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm019386 Prunus mume Pm019386 I 0.751
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.732
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.720
mgf026642m Mimulus guttatus mgf026642m I 0.708
PK23332.1 Cannabis sativa PK23332.1 I 0.705
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.705
Cla011674 Citrullus lanatus Cla011674 I 0.704
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.704
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.701
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.700
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.700
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.700
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.700
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.697
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.697
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.697
DREB1B Arabidopsis thaliana AT4G25490 D 0.696
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.695
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.694
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.694
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.694
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.693
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.693
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.693
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.692
MDP0000154764 Malus domestica MDP0000154764 I 0.692
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.692
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.691
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.691
Cla006315 Citrullus lanatus Cla006315 I 0.690
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.689
Pm023775 Prunus mume Pm023775 I 0.689
Ca_00768 Cicer arietinum Ca_00768 N 0.687
Cla017994 Citrullus lanatus Cla017994 N 0.687
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.687
TCM_016175 Theobroma cacao TCM_016175 I 0.687
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.684
mgf017477m Mimulus guttatus mgf017477m N 0.683
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.683
Carubv10006809m.g Capsella rubella Carubv10006809m.g I 0.683
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.682
mgf017136m Mimulus guttatus mgf017136m I 0.682
Cla021417 Citrullus lanatus Cla021417 I 0.681
MDP0000198054 Malus domestica MDP0000198054 I 0.680
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.679
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.679
DREB1A Arabidopsis thaliana AT4G25480 D 0.679
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.678
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.678
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.678
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I 0.678
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.678