GLYMA17G05240 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA17G05240 T002000_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.783 0.880
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.783 0.880
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.778 0.880
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.778 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G05240.1 AP2 16 67

Links

Other AP2 family TFs
Other Glycine max TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29739.m003647 Ricinus communis 29739.m003647 I 0.745
29739.m003716 Ricinus communis 29739.m003716 I 0.777
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.762
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.681
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.780
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.699
Bo2g023630 Brassica oleracea Bo2g023630 I 0.731
Bo3g015600 Brassica oleracea Bo3g015600 I 0.716
Bo6g086740 Brassica oleracea Bo6g086740 I 0.776
Bo6g119120 Brassica oleracea Bo6g119120 I 0.780
Bo8g068370 Brassica oleracea Bo8g068370 I 0.762
Bo8g102870 Brassica oleracea Bo8g102870 I 0.787
Bo9g149820 Brassica oleracea Bo9g149820 I 0.715
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.715
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.783
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.754
Bra002377 Brassica rapa Bra002377 I 0.715
Bra003780 Brassica rapa Bra003780 I 0.776
Bra006599 Brassica rapa Bra006599 I 0.716
Bra015882 Brassica rapa Bra015882 I 0.784
Bra016518 Brassica rapa Bra016518 I 0.762
Bra020162 Brassica rapa Bra020162 I 0.730
Bra025719 Brassica rapa Bra025719 I 0.751
Bra031069 Brassica rapa Bra031069 I 0.787
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.776
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.778
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.715
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.778
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.776
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.780
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.772
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.778
Ca_01683 Cicer arietinum Ca_01683 I 0.769
Ca_09124 Cicer arietinum Ca_09124 I 0.798
Ca_19295 Cicer arietinum Ca_19295 I 0.762
Ca_19296 Cicer arietinum Ca_19296 I 0.757
Ca_19297 Cicer arietinum Ca_19297 I 0.746
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.740
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.788
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.752
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.785
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.779
Cla007584 Citrullus lanatus Cla007584 I 0.757
Cla011318 Citrullus lanatus Cla011318 I 0.757
Cla022291 Citrullus lanatus Cla022291 I 0.709
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.709
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.757
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.735
ERF016 Arabidopsis thaliana AT5G21960 I 0.711
ERF017 Arabidopsis thaliana AT1G19210 D 0.778
ERF018 Arabidopsis thaliana AT1G74930 D 0.783
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.776
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.718
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.774
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.775
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.778
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.783
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.773
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.773
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.772
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.830
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.762
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.772
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.768
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.780
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.761
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.727
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.749
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.778
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.766
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.744
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.719
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.697
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.722
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.735
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.760
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.766
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.766
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.760
MDP0000649022 Malus domestica MDP0000649022 I 0.768
MDP0000704216 Malus domestica MDP0000704216 I 0.780
mgf021940m Mimulus guttatus mgf021940m I 0.782
mgf024162m Mimulus guttatus mgf024162m I 0.781
mgf025452m Mimulus guttatus mgf025452m I 0.770
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.713
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.781
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.773
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.773
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.726
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.761
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.761
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.775
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.716
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.716
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.684
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.699
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.699
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.699
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.699
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.787
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.783
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.785
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.699
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.699
OS02G0781300 Oryza sativa OS02G0781300 I 0.699
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.744
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.745
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.781
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.714
PK18548.1 Cannabis sativa PK18548.1 I 0.729
Pm027117 Prunus mume Pm027117 I 0.777
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.767
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.778
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.776
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.760
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.777
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.774
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.776
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.769
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.776
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.715
Si008104m.g Setaria italica Si008104m.g I 0.713
Si019636m.g Setaria italica Si019636m.g I 0.744
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.714
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.781
TCM_037415 Theobroma cacao TCM_037415 I 0.768
TCM_037486 Theobroma cacao TCM_037486 I 0.785
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.786
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.712
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.767
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.691
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.721
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.782