GLYMA17G18580 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA17G18580 T002011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-9
M06633_2.00
Arabidopsis thaliana
NNNNNNNDBCACCGACMHH

DDKGTCGGTGVHNNNNNNN
Dap-seq
OMalley et al.(2016)
DEAR5_col_a
0.789 0.940
RAP2-9
M06634_2.00
Arabidopsis thaliana
NCACCGACMHH

DDKGTCGGTGN
Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a
0.789 0.940
ERF011
M06628_2.00
Arabidopsis thaliana
YHNHHDYCACCGHCN

NGDCGGTGRHDDNDR
Dap-seq
OMalley et al.(2016)
CEJ1_col_a
0.768 0.880
ERF011
M06629_2.00
Arabidopsis thaliana
NDNCACCGACMHH

DDKGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a
0.768 0.880
RAP2-10
M00850_2.00
Arabidopsis thaliana
NNRCCGHCNN

NNGDCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DEAR4
0.768 0.920
ERF010
M06690_2.00
Arabidopsis thaliana
HHNHHDYCACCGHCD

HGDCGGTGRHDDNDD
Dap-seq
OMalley et al.(2016)
DEAR2_col_a
0.768 0.900
ERF010
M06691_2.00
Arabidopsis thaliana
NNNHDBCACCGACAH

DTGTCGGTGVHDNNN
Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a
0.768 0.900
ERF008
M00844_2.00
Arabidopsis thaliana
SHRCCGHC

GDCGGYDS
PBM
Franco-Zorrilla et al.(2014)
DEAR3
0.758 0.900
ERF008
M01048_2.00
Arabidopsis thaliana
CRCCGMCN

NGKCGGYG
PBM
Sullivan et al.(2014)
pTH7672
0.758 0.900
ERF008
M06602_2.00
Arabidopsis thaliana
NNNNNBCACCGACAHHN

NDDTGTCGGTGVNNNNN
Dap-seq
OMalley et al.(2016)
DEAR3_col_a
0.758 0.900
ERF008
M06603_2.00
Arabidopsis thaliana
NNBCACCGACAWH

DWTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a
0.758 0.900
RAP2-1
M06582_2.00
Arabidopsis thaliana
NHDYCRCCGMCAH

DTGKCGGYGRHDN
Dap-seq
OMalley et al.(2016)
RAP21_col_a
0.707 0.820
RAP2-1
M06583_2.00
Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN

NNNNNHDDTGTCGGTGVHDN
Dap-seq
OMalley et al.(2016)
RAP21_colamp_a
0.707 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G18580.1 AP2 22 73

Links

Other AP2 family TFs
Other Glycine max TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28718.m000038 Ricinus communis 28718.m000038 I 0.780
30170.m013843 Ricinus communis 30170.m013843 I 0.770
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.700
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.772
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.770
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.751
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.751
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.767
Bo1g004940 Brassica oleracea Bo1g004940 I 0.758
Bo4g151460 Brassica oleracea Bo4g151460 I 0.768
Bo7g063980 Brassica oleracea Bo7g063980 I 0.768
Bo7g118430 Brassica oleracea Bo7g118430 I 0.768
Bo8g079660 Brassica oleracea Bo8g079660 I 0.768
Bo9g020380 Brassica oleracea Bo9g020380 I 0.762
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.768
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.752
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.768
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.752
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.758
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.768
Bra011744 Brassica rapa Bra011744 I 0.768
Bra012140 Brassica rapa Bra012140 I 0.747
Bra014056 Brassica rapa Bra014056 I 0.762
Bra017811 Brassica rapa Bra017811 I 0.768
Bra032173 Brassica rapa Bra032173 I 0.768
Bra036061 Brassica rapa Bra036061 I 0.768
Bra037124 Brassica rapa Bra037124 I 0.762
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.767
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.751
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.768
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.768
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.752
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.768
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.768
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.768
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.752
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.768
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.768
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.768
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.789
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.770
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.770
Ca_01556 Cicer arietinum Ca_01556 I 0.710
Ca_02170 Cicer arietinum Ca_02170 I 0.800
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.768
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.768
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.780
Cla014175 Citrullus lanatus Cla014175 I 0.765
Cla020550 Citrullus lanatus Cla020550 I 0.779
Cla020961 Citrullus lanatus Cla020961 I 0.762
Cla022937 Citrullus lanatus Cla022937 I 0.756
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.765
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.762
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.779
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.756
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.768
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.768
ERF008 Arabidopsis thaliana AT2G23340 D 0.758
ERF010 Arabidopsis thaliana AT5G67190 D 0.768
ERF011 Arabidopsis thaliana AT3G50260 D 0.768
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.760
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.762
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.762
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.780
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.756
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.780
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.802
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.777
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.804
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.777
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.802
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.762
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.756
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.780
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.750
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.780
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.762
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.750
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.744
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.751
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.742
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.751
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.760
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.744
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.763
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.734
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.738
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.733
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.745
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.756
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.748
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.802
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.712
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.750
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.751
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.767
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.790
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.772
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.770
MDP0000125673 Malus domestica MDP0000125673 I 0.780
MDP0000179962 Malus domestica MDP0000179962 I 0.780
MDP0000756341 Malus domestica MDP0000756341 I 0.766
mgf000289m Mimulus guttatus mgf000289m I 0.758
mgf006561m Mimulus guttatus mgf006561m I 0.764
mgf021115m Mimulus guttatus mgf021115m I 0.770
mgf025363m Mimulus guttatus mgf025363m I 0.745
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.751
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.751
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.710
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.800
OBART06G04460 Oryza barthii OBART06G04460 I 0.767
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.751
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.767
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.751
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.751
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.767
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.767
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.780
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.768
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.751
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.767
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.767
OS04G0648900 Oryza sativa OS04G0648900 I 0.751
OS06G0166400 Oryza sativa OS06G0166400 I 0.767
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.751
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.767
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.751
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.767
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.770
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.758
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.764
PK15612.1 Cannabis sativa PK15612.1 I 0.752
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.770
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.789
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.789
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.770
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.772
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.778
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.707
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.768
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.789
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.709
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.768
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.789
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.772
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.770
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.789
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.775
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.775
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.770
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.751
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.767
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.758
TCM_000669 Theobroma cacao TCM_000669 I 0.780
TCM_033791 Theobroma cacao TCM_033791 I 0.760
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.736
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.768
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.768
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.781
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.751
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.817
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.738