CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G33840
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA20G33840
T002061_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN
NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.684
0.837
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.684
0.837
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G33840.2
AP2
62
114
TCYRGVRQRPWGKFTAEIRDPARNGARAWLGTYQTAEDAALAYDRAAFKLRGS
Links
Other
AP2
family TFs
Other
Glycine max
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy