GLYMA20G34550 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA20G34550 T002063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.806 0.769
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.781 0.769
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.754 0.788
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.754 0.788
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.748 0.692
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.748 0.692
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.748 0.692
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.744 0.654
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.744 0.654
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.731 0.692
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.729 0.654
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.728 0.654
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.728 0.731
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN

NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.727 0.731
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.725 0.673
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.725 0.673
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.720 0.712
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.720 0.712
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.720 0.712
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.715 0.692
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.714 0.673
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.714 0.673
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.711 0.731
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.711 0.731
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.708 0.673
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.706 0.712
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.705 0.654
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.705 0.712
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.705 0.712
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.705 0.712
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.705 0.712
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.705 0.712
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.703 0.692
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.703 0.692
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.698 0.712
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.692 0.673
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.688 0.750
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.683 0.635
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.682 0.673
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.682 0.673
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.682 0.673
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY

RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.681 0.692
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.681 0.596
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.680 0.692
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.680 0.692
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.680 0.692
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC

GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.680 0.673
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.678 0.692
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G34550.1 AP2 17 69

Links

Other AP2 family TFs
Other Glycine max TFs

1692 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31820 Aegilops tauschii F775_31820 N 0.000
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
MLOC_64240 Hordeum vulgare MLOC_64240 N 0.000
LPERR12G15510 Leersia perrieri LPERR12G15510 N 0.000
LPERR01G22040 Leersia perrieri LPERR01G22040 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
Lus10025078.g Linum usitatissimum Lus10025078.g N 0.000
Lus10014342.g Linum usitatissimum Lus10014342.g N 0.000
OBART12G18490 Oryza barthii OBART12G18490 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
OB12G25170 Oryza brachyantha OB12G25170 N 0.000
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N 0.000
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N 0.000
OGLUM02G04830 Oryza glumaepatula OGLUM02G04830 N 0.000
BGIOSGA025747 Oryza indica BGIOSGA025747 N 0.000
BGIOSGA037778 Oryza indica BGIOSGA037778 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
OLONG_012578 Oryza longistaminata OLONG_012578 N 0.000
OMERI12G13180 Oryza meridionalis OMERI12G13180 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
OMERI07G11790 Oryza meridionalis OMERI07G11790 N 0.000
OMERI07G09680 Oryza meridionalis OMERI07G09680 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
ONIVA12G17390 Oryza nivara ONIVA12G17390 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
ONIVA07G13650 Oryza nivara ONIVA07G13650 N 0.000
ONIVA07G09980 Oryza nivara ONIVA07G09980 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
OPUNC12G16690 Oryza punctata OPUNC12G16690 N 0.000
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Pavir.Fb00532 Panicum virgatum Pavir.Fb00532 N 0.000
Pavir.Ca02777 Panicum virgatum Pavir.Ca02777 N 0.000
Pavir.J24268 Panicum virgatum Pavir.J24268 N 0.000
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N 0.000
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Si022747m.g Setaria italica Si022747m.g N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N 0.000
Sb05g008290 Sorghum bicolor Sb05g008290 N 0.000
Sb08g021080 Sorghum bicolor Sb08g021080 N 0.000
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N 0.000
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N 0.000
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000
TRIUR3_03598 Triticum urartu TRIUR3_03598 N 0.000
GRMZM2G054252 Zea mays GRMZM2G054252 N 0.000
GRMZM2G114850 Zea mays GRMZM2G114850 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000