CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G130459
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G130459
T002171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G130459_P01
AP2
178
239
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLSGSYDTEEKAARAYDVAAIKYWGE
GRMZM2G130459_P01
AP2
306
358
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
GRMZM2G130459_P02
AP2
178
238
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGE
GRMZM2G130459_P02
AP2
280
332
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
GRMZM2G130459_P03
AP2
178
239
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLSGSYDTEEKAARAYDVAAIKYWGE
GRMZM2G130459_P03
AP2
281
331
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKEEAAEAYDIAAIEIRGK
Links
Other
AP2
family TFs
Other
Zea mays
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb04g027940
Sorghum bicolor
Sb04g027940
N
0.899
OB02G39430
Oryza brachyantha
OB02G39430
N
0.898
Si017580m.g
Setaria italica
Si017580m.g
N
0.897
OS02G0747600
Oryza sativa
OS02G0747600
N
0.894
ORGLA02G0280000
Oryza glaberrima
ORGLA02G0280000
N
0.894
Pavir.Ab02943
Panicum virgatum
Pavir.Ab02943
N
0.890
Pavir.Aa00475
Panicum virgatum
Pavir.Aa00475
N
0.889
BRADI3G59300
Brachypodium distachyon
BRADI3G59300
N
0.878
MLOC_76689
Hordeum vulgare
MLOC_76689
N
0.852
OPUNC02G30010
Oryza punctata
OPUNC02G30010
N
0.849
Traes_6BL_340C2A897
Triticum aestivum
Traes_6BL_340C2A897
N
0.846
Traes_6DL_2BAA4B7AA
Triticum aestivum
Traes_6DL_2BAA4B7AA
N
0.845
ORUFI02G34150
Oryza rufipogon
ORUFI02G34150
N
0.838
OBART02G32450
Oryza barthii
OBART02G32450
N
0.838
LPERR02G26580
Leersia perrieri
LPERR02G26580
N
0.833
OMERI02G31100
Oryza meridionalis
OMERI02G31100
N
0.831
Traes_6AL_CE4E76E1A
Triticum aestivum
Traes_6AL_CE4E76E1A
N
0.812
F775_28442
Aegilops tauschii
F775_28442
N
0.781
TRIUR3_24654
Triticum urartu
TRIUR3_24654
N
0.781
ORGLA03G0090300
Oryza glaberrima
ORGLA03G0090300
I
0.703
OS03G0232200
Oryza sativa
OS03G0232200
I
0.703
MLOC_10221
Hordeum vulgare
MLOC_10221
I
0.692
BRADI1G69207
Brachypodium distachyon
BRADI1G69207
I
0.692
Traes_4DL_63ACC4A09
Triticum aestivum
Traes_4DL_63ACC4A09
I
0.692
Traes_4AS_93BB8FB3E
Triticum aestivum
Traes_4AS_93BB8FB3E
I
0.692
OB03G19620
Oryza brachyantha
OB03G19620
I
0.682
Traes_4BL_D4491E3AB
Triticum aestivum
Traes_4BL_D4491E3AB
I
0.681