GRMZM5G846057 (Zea mays)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GRMZM5G846057 T002263_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.687 0.740
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.687 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM5G846057_P01 AP2 114 165

Links

Other AP2 family TFs
Other Zea mays TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G100982 Zea mays GRMZM2G100982 I 0.834
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N 0.814
Sb09g029070 Sorghum bicolor Sb09g029070 N 0.814
MLOC_53577 Hordeum vulgare MLOC_53577 N 0.808
OS05G0572000 Oryza sativa OS05G0572000 N 0.797
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N 0.797
Pavir.J10163 Panicum virgatum Pavir.J10163 N 0.797
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N 0.797
Pavir.J01332 Panicum virgatum Pavir.J01332 N 0.797
BGIOSGA017525 Oryza indica BGIOSGA017525 N 0.797
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N 0.797
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N 0.797
ONIVA05G28560 Oryza nivara ONIVA05G28560 N 0.797
LPERR05G22130 Leersia perrieri LPERR05G22130 N 0.797
OPUNC05G24070 Oryza punctata OPUNC05G24070 N 0.797
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I 0.788
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I 0.775
mgf016403m Mimulus guttatus mgf016403m I 0.726
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I 0.722
GSMUA_Achr1G27990_001 Musa acuminata GSMUA_Achr1G27990_001 N 0.707
Gorai.007G026200 Gossypium raimondii Gorai.007G026200 N 0.703
Cla011559 Citrullus lanatus Cla011559 I 0.693
Cucsa.303840 Cucumis sativus Cucsa.303840 I 0.693
Cagra.0917s0073 Capsella grandiflora Cagra.0917s0073 I 0.693
Bostr.0568s0279 Boechera stricta Bostr.0568s0279 I 0.693
Carubv10026925m.g Capsella rubella Carubv10026925m.g I 0.693
AT5G65130 Arabidopsis thaliana AT5G65130 D 0.687
scaffold_803239.1 Arabidopsis lyrata scaffold_803239.1 I 0.687
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I 0.678
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I 0.678