GSMUA_Achr1G00070_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr1G00070_001 T002308_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.793 0.920
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.793 0.920
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.777 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P00070_001 AP2 227 278

Links

Other AP2 family TFs
Other Musa acuminata TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_00735 Schistosoma haematobium A_00735 I 0.000
ECPE_0000151501 Echinostoma caproni ECPE_0000151501 N 0.000
GA11206 Drosophila pseudoobscura FBgn0071260 I 0.000
GD12820 Drosophila simulans FBgn0184546 I 0.000
GF24569 Drosophila ananassae FBgn0101563 I 0.000
GJ11303 Drosophila virilis FBgn0198564 I 0.000
GM24770 Drosophila sechellia FBgn0179633 I 0.000
PEQ_0000503301 Parascaris equorum PEQ_0000503301 I 0.000
SCUD_0002144401 Schistosoma curassoni SCUD_0002144401 I 0.000
Smp_145650 Schistosoma mansoni Smp_145650 I 0.000
SMRZ_0002168001 Schistosoma margrebowiei SMRZ_0002168001 I 0.000
SMTD_0000908801 Schistosoma mattheei SMTD_0000908801 I 0.000
SROB_0001634001 Schistosoma rodhaini SROB_0001634001 I 0.000
TRE_0001722301 Trichobilharzia regenti TRE_0001722301 N 0.000