GSMUA_Achr1G01620_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr1G01620_001 T002312_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN

NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.729 0.886
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN

NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.729 0.886
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.728 0.886
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.728 0.886
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.728 0.886
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.713 0.864
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.713 0.864
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.704 0.841
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.704 0.841
Q8LKX0_MAIZE
M09722_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.679 0.864
Q5MAR7_BRANA
M09742_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII1_01
0.677 0.841
Q3HS44_BRANA
M09741_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII2_01
0.677 0.841
Q3HS43_BRANA
M09740_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII3_01
0.677 0.841
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P01620_001 AP2 90 135

Links

Other AP2 family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action