GSMUA_Achr2G10490_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr2G10490_001 T002329_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.818 0.824
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.818 0.824
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.818 0.824
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.809 0.804
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN

NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.802 0.804
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.788 0.804
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.788 0.804
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.765 0.745
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.765 0.745
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.765 0.745
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.760 0.725
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.752 0.725
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.742 0.745
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.742 0.745
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.742 0.745
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.736 0.725
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.731 0.725
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.731 0.725
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.726 0.745
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.726 0.745
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.721 0.784
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.720 0.667
ERF6
M01621_2.00
Arabidopsis thaliana
NNGCCGGCVN

NBGCCGGCNN
PBM
Weirauch et al.(2014)
pTH7228
0.716 0.706
ERF6
M06637_2.00
Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHDDNDN
Dap-seq
OMalley et al.(2016)
ERF6_col
0.716 0.706
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.715 0.745
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.715 0.745
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.712 0.686
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.712 0.588
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.712 0.627
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.698 0.725
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.698 0.725
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.698 0.725
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.694 0.627
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.692 0.647
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.692 0.647
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.690 0.667
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.690 0.667
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.688 0.686
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.688 0.686
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.686 0.686
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.684 0.706
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.684 0.706
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.684 0.706
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.684 0.706
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.684 0.706
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.682 0.667
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.681 0.686
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.681 0.686
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.681 0.686
0100010458
M01644_2.00
Ostreococcus tauri
MGCCGSCR

YGSCGGCK
PBM
Weirauch et al.(2014)
pTH9447
0.680 0.686
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.679 0.667
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.679 0.667
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.679 0.667
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.679 0.667
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.679 0.667
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.678 0.667
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.677 0.588
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P10490_001 AP2 99 151

Links

Other AP2 family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

1752 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action