GSMUA_Achr2G21900_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr2G21900_001 T002337_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.709 0.812
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.692 0.729
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.692 0.729
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.685 0.750
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.677 0.604
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P21900_001 AP2 81 131

Links

Other AP2 family TFs
Other Musa acuminata TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.729
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I 0.721
OLONG_007389 Oryza longistaminata OLONG_007389 I 0.721
OBART09G11390 Oryza barthii OBART09G11390 I 0.721
OB09G17960 Oryza brachyantha OB09G17960 I 0.721
LPERR09G08060 Leersia perrieri LPERR09G08060 I 0.721
Pavir.J01991 Panicum virgatum Pavir.J01991 I 0.721
OMERI09G08870 Oryza meridionalis OMERI09G08870 I 0.721
OPUNC09G09870 Oryza punctata OPUNC09G09870 I 0.721
Sb02g025530 Sorghum bicolor Sb02g025530 I 0.721
Si030088m.g Setaria italica Si030088m.g I 0.721
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I 0.721
OS09G0434500 Oryza sativa OS09G0434500 I 0.721
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I 0.721
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I 0.721
ONIVA09G11170 Oryza nivara ONIVA09G11170 I 0.721
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I 0.721
BGIOSGA030816 Oryza indica BGIOSGA030816 I 0.721
mgf009667m Mimulus guttatus mgf009667m I 0.720
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.720
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.720
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.720
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.720
mgf010035m Mimulus guttatus mgf010035m I 0.720
Gorai.010G236100 Gossypium raimondii Gorai.010G236100 I 0.720
MLOC_69925 Hordeum vulgare MLOC_69925 I 0.714
GSMUA_Achr5G24060_001 Musa acuminata GSMUA_Achr5G24060_001 I 0.711
SapurV1A.1115s0040 Salix purpurea SapurV1A.1115s0040 I 0.709
PGSC0003DMG400009142 Solanum tuberosum PGSC0003DMG400009142 I 0.709
Q7Y1W2_TOBAC Nicotiana tabacum Q7Y1W2_TOBAC D 0.709
mgf005222m Mimulus guttatus mgf005222m I 0.709
Cla022096 Citrullus lanatus Cla022096 I 0.707
F775_07667 Aegilops tauschii F775_07667 I 0.706
Pavir.J04875 Panicum virgatum Pavir.J04875 I 0.705
MLOC_38561 Hordeum vulgare MLOC_38561 I 0.705
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I 0.705
F775_31907 Aegilops tauschii F775_31907 I 0.705
F775_30714 Aegilops tauschii F775_30714 I 0.705
ONIVA06G06990 Oryza nivara ONIVA06G06990 I 0.705
TRIUR3_20682 Triticum urartu TRIUR3_20682 I 0.705
Traes_6AL_DAA2D7F8A Triticum aestivum Traes_6AL_DAA2D7F8A I 0.705
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I 0.705
GSMUA_Achr2G07300_001 Musa acuminata GSMUA_Achr2G07300_001 I 0.705
Si017568m.g Setaria italica Si017568m.g I 0.705
Traes_6BL_6AEADC565 Triticum aestivum Traes_6BL_6AEADC565 I 0.705
Pavir.Aa00281 Panicum virgatum Pavir.Aa00281 I 0.705
TRIUR3_08978 Triticum urartu TRIUR3_08978 I 0.705
Traes_6DL_DD82BD107 Triticum aestivum Traes_6DL_DD82BD107 I 0.705
GRMZM2G018398 Zea mays GRMZM2G018398 I 0.705
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I 0.705
Traes_6AS_A9D28899F Triticum aestivum Traes_6AS_A9D28899F I 0.704
F775_25662 Aegilops tauschii F775_25662 I 0.704
MLOC_10017 Hordeum vulgare MLOC_10017 I 0.704
Q6TXK7_SOLLC Solanum lycopersicum Q6TXK7_SOLLC I 0.703
OGLUM03G06060 Oryza glumaepatula OGLUM03G06060 I 0.703
Solyc03g123500.2 Solanum lycopersicum Solyc03g123500.2 I 0.703
OS03G0183000 Oryza sativa OS03G0183000 I 0.703
ORUFI03G05890 Oryza rufipogon ORUFI03G05890 I 0.703
BGIOSGA011328 Oryza indica BGIOSGA011328 I 0.703
ORGLA03G0058500 Oryza glaberrima ORGLA03G0058500 I 0.703
ONIVA03G06080 Oryza nivara ONIVA03G06080 I 0.703
OMERI03G05890 Oryza meridionalis OMERI03G05890 I 0.703
Thhalv10023946m.g Eutrema salsugineum Thhalv10023946m.g I 0.703
GSMUA_Achr3G05800_001 Musa acuminata GSMUA_Achr3G05800_001 I 0.703
OBART03G06060 Oryza barthii OBART03G06060 I 0.703
LPERR03G05400 Leersia perrieri LPERR03G05400 I 0.703
Pavir.Ba00410 Panicum virgatum Pavir.Ba00410 I 0.701
GRMZM2G052667 Zea mays GRMZM2G052667 I 0.701
MDP0000308922 Malus domestica MDP0000308922 I 0.700
GSMUA_Achr9G18090_001 Musa acuminata GSMUA_Achr9G18090_001 I 0.700
GSMUA_Achr8G23730_001 Musa acuminata GSMUA_Achr8G23730_001 I 0.700
Cla015763 Citrullus lanatus Cla015763 I 0.700
Lus10013186.g Linum usitatissimum Lus10013186.g I 0.700
Eucgr.I02155 Eucalyptus grandis Eucgr.I02155 I 0.700
MDP0000403580 Malus domestica MDP0000403580 I 0.700
Ca_16180 Cicer arietinum Ca_16180 I 0.700
VIT_09s0002g00470 Vitis vinifera VIT_09s0002g00470 I 0.700
GLYMA19G45200 Glycine max GLYMA19G45200 I 0.700
GLYMA03G42450 Glycine max GLYMA03G42450 I 0.700
gene05448-v1.0-hybrid Fragaria vesca gene05448-v1.0-hybrid I 0.700
SapurV1A.1700s0030 Salix purpurea SapurV1A.1700s0030 I 0.700
Aquca_020_00575 Aquilegia coerulea Aquca_020_00575 I 0.700
TCM_029232 Theobroma cacao TCM_029232 I 0.700
GSMUA_Achr3G10140_001 Musa acuminata GSMUA_Achr3G10140_001 I 0.700
evm.TU.supercontig_481.1 Carica papaya evm.TU.supercontig_481.1 I 0.700
POPTR_0001s16400 Populus trichocarpa POPTR_0001s16400 I 0.700
cassava31610.valid.m1 Manihot esculenta cassava31610.valid.m1 I 0.700
cassava31609.valid.m1 Manihot esculenta cassava31609.valid.m1 I 0.700
27585.m000144 Ricinus communis 27585.m000144 I 0.700
MTR_8g022820 Medicago truncatula MTR_8g022820 I 0.700
Gorai.011G056300 Gossypium raimondii Gorai.011G056300 I 0.700
Cucsa.359880 Cucumis sativus Cucsa.359880 I 0.700
PK15234.1 Cannabis sativa PK15234.1 I 0.700
MTR_2g105380 Medicago truncatula MTR_2g105380 I 0.700
Lus10037448.g Linum usitatissimum Lus10037448.g I 0.700
GSMUA_Achr6G10870_001 Musa acuminata GSMUA_Achr6G10870_001 I 0.698
AMTR_s00129p00119770 Amborella trichopoda AMTR_s00129p00119770 I 0.698
GSMUA_Achr7G18930_001 Musa acuminata GSMUA_Achr7G18930_001 I 0.697
ERF071 Arabidopsis thaliana AT2G47520 I 0.697
Pavir.Bb03337 Panicum virgatum Pavir.Bb03337 I 0.697
Aquca_003_00658 Aquilegia coerulea Aquca_003_00658 I 0.696
POPTR_0003s06930 Populus trichocarpa POPTR_0003s06930 I 0.696
evm.TU.supercontig_2304.1 Carica papaya evm.TU.supercontig_2304.1 I 0.696
Si030514m.g Setaria italica Si030514m.g I 0.696
MLOC_77669 Hordeum vulgare MLOC_77669 I 0.696
PRUPE_ppa006366mg Prunus persica PRUPE_ppa006366mg I 0.696
Pm013172 Prunus mume Pm013172 I 0.696
Ciclev10005701m.g Citrus clementina Ciclev10005701m.g I 0.694
HRE2 Vitis vinifera VIT_07s0005g00820 I 0.694
TCM_004710 Theobroma cacao TCM_004710 I 0.694
orange1.1g025382m.g Citrus sinensis orange1.1g025382m.g I 0.694
Gorai.009G147300 Gossypium raimondii Gorai.009G147300 I 0.694
mgf014502m Mimulus guttatus mgf014502m I 0.693
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I 0.692
Cucsa.149280 Cucumis sativus Cucsa.149280 I 0.692
RAP2.3 Vitis vinifera VIT_05s0077g01860 I 0.692
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I 0.692
gene07057-v1.0-hybrid Fragaria vesca gene07057-v1.0-hybrid I 0.692
TCM_021264 Theobroma cacao TCM_021264 I 0.692
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I 0.692
PGSC0003DMG400004898 Solanum tuberosum PGSC0003DMG400004898 I 0.692
Carubv10009538m.g Capsella rubella Carubv10009538m.g I 0.692
RAP2-12 Arabidopsis thaliana AT1G53910 D 0.692
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I 0.692
Cla012751 Citrullus lanatus Cla012751 I 0.692
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I 0.691
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I 0.691
Pm008236 Prunus mume Pm008236 I 0.690
PRUPE_ppa008563mg Prunus persica PRUPE_ppa008563mg I 0.690
Gorai.011G193600 Gossypium raimondii Gorai.011G193600 I 0.689
cassava43050.valid.m1 Manihot esculenta cassava43050.valid.m1 I 0.689
F775_15852 Aegilops tauschii F775_15852 I 0.689
MLOC_78827 Hordeum vulgare MLOC_78827 I 0.688
SapurV1A.0264s0250 Salix purpurea SapurV1A.0264s0250 I 0.688
estExt_fgenesh1_pg.C_Chr_04.00010339 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_04.00010339 I 0.688
fgenesh1_pm.chr_4_#_35 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_35 I 0.688
OSTLU_9237 Ostreococcus lucimarinus OSTLU_9237 I 0.688
OB07G27820 Oryza brachyantha OB07G27820 I 0.687
Cucsa.252810 Cucumis sativus Cucsa.252810 I 0.687
LjSGA_008718.1 Lotus japonicus LjSGA_008718.1 I 0.687
Gorai.006G260300 Gossypium raimondii Gorai.006G260300 I 0.687
AMTR_s00010p00098700 Amborella trichopoda AMTR_s00010p00098700 I 0.687
cassava37155.valid.m1 Manihot esculenta cassava37155.valid.m1 I 0.687
Bo3g184310 Brassica oleracea Bo3g184310 I 0.686
MDP0000128979 Malus domestica MDP0000128979 I 0.686
EREBP1 Oryza sativa OS02G0782700 D 0.685
OBART02G34990 Oryza barthii OBART02G34990 I 0.685
OBART06G06020 Oryza barthii OBART06G06020 I 0.685
OB02G41790 Oryza brachyantha OB02G41790 I 0.685
LPERR06G05580 Leersia perrieri LPERR06G05580 I 0.685
BRADI3G60120 Brachypodium distachyon BRADI3G60120 I 0.685
OGLUM02G36100 Oryza glumaepatula OGLUM02G36100 I 0.685
OB06G15590 Oryza brachyantha OB06G15590 I 0.685
OS06G0194000 Oryza sativa OS06G0194000 I 0.685
OGLUM06G06300 Oryza glumaepatula OGLUM06G06300 I 0.685
ONIVA02G37060 Oryza nivara ONIVA02G37060 I 0.685
OMERI06G07210 Oryza meridionalis OMERI06G07210 I 0.685
BGIOSGA022463 Oryza indica BGIOSGA022463 I 0.685
OPUNC02G32270 Oryza punctata OPUNC02G32270 I 0.685
ORGLA02G0302700 Oryza glaberrima ORGLA02G0302700 I 0.685
OPUNC06G05780 Oryza punctata OPUNC06G05780 I 0.685
BGIOSGA005480 Oryza indica BGIOSGA005480 I 0.685
ORUFI02G36450 Oryza rufipogon ORUFI02G36450 I 0.685
ORUFI06G06250 Oryza rufipogon ORUFI06G06250 I 0.685
OLONG_013314 Oryza longistaminata OLONG_013314 I 0.685
OLONG_008836 Oryza longistaminata OLONG_008836 I 0.685
OMERI02G32980 Oryza meridionalis OMERI02G32980 I 0.685
GLYMA07G04950 Glycine max GLYMA07G04950 I 0.684
Lus10032353.g Linum usitatissimum Lus10032353.g I 0.684
GLYMA16G01500 Glycine max GLYMA16G01500 I 0.684
LPERR02G28780 Leersia perrieri LPERR02G28780 I 0.684
Lus10033938.g Linum usitatissimum Lus10033938.g I 0.684
Lus10016827.g Linum usitatissimum Lus10016827.g I 0.684
Solyc06g063070.2 Solanum lycopersicum Solyc06g063070.2 I 0.683
Carubv10025530m.g Capsella rubella Carubv10025530m.g I 0.683
GRMZM2G110333 Zea mays GRMZM2G110333 I 0.683
Cagra.0551s0010 Capsella grandiflora Cagra.0551s0010 I 0.683
Ca_14758 Cicer arietinum Ca_14758 I 0.682
Traes_6BS_2291F7F98 Triticum aestivum Traes_6BS_2291F7F98 I 0.682
POPTR_0010s00900 Populus trichocarpa POPTR_0010s00900 I 0.682
MTR_2g435590 Medicago truncatula MTR_2g435590 I 0.682
MDP0000413387 Malus domestica MDP0000413387 I 0.682
MDP0000890854 Malus domestica MDP0000890854 I 0.681
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.681
evm.TU.supercontig_151.29 Carica papaya evm.TU.supercontig_151.29 I 0.681
evm.TU.supercontig_3.43 Carica papaya evm.TU.supercontig_3.43 I 0.681
AMTR_s00003p00135920 Amborella trichopoda AMTR_s00003p00135920 I 0.681
Lus10008214.g Linum usitatissimum Lus10008214.g I 0.681
Lus10003601.g Linum usitatissimum Lus10003601.g I 0.681
Bra019270 Brassica rapa Bra019270 I 0.680
Bra013730 Brassica rapa Bra013730 I 0.680
Gorai.003G082200 Gossypium raimondii Gorai.003G082200 I 0.680
Bo7g109100 Brassica oleracea Bo7g109100 I 0.680
Bo1g037170 Brassica oleracea Bo1g037170 I 0.680
Bostr.10273s0115 Boechera stricta Bostr.10273s0115 I 0.679
Thhalv10026857m.g Eutrema salsugineum Thhalv10026857m.g I 0.679
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.679
Ca_15022 Cicer arietinum Ca_15022 I 0.679
Bostr.25993s0004 Boechera stricta Bostr.25993s0004 I 0.678
MLOC_67996 Hordeum vulgare MLOC_67996 I 0.678
Gorai.013G043700 Gossypium raimondii Gorai.013G043700 I 0.677
SapurV1A.2778s0010 Salix purpurea SapurV1A.2778s0010 I 0.677
CRF2 Arabidopsis thaliana AT4G23750 D 0.677
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.677
SapurV1A.0643s0230 Salix purpurea SapurV1A.0643s0230 I 0.677
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.677
MTR_5g009620 Medicago truncatula MTR_5g009620 I 0.677
Cla011108 Citrullus lanatus Cla011108 I 0.677
cassava38228.valid.m1 Manihot esculenta cassava38228.valid.m1 I 0.677
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.677
mgf008137m Mimulus guttatus mgf008137m I 0.677
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.677
Gorai.008G025100 Gossypium raimondii Gorai.008G025100 I 0.677
POPTR_0009s10470 Populus trichocarpa POPTR_0009s10470 I 0.677
Gorai.005G238000 Gossypium raimondii Gorai.005G238000 I 0.677
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.677
TCM_007061 Theobroma cacao TCM_007061 I 0.677
LPERR07G19320 Leersia perrieri LPERR07G19320 I 0.677