GSMUA_Achr4G06170_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr4G06170_001 T002371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.709 0.851
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.709 0.851
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.709 0.851
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.687 0.787
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.687 0.787
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.687 0.787
ERF11
M01606_2.00 		Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN		 PBM
Weirauch et al.(2014)
pTH8117 		0.683 0.766
ERF11
M06575_2.00 		Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF11_colamp_a 		0.683 0.766
ERF11
M06576_2.00 		Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN		 Dap-seq
OMalley et al.(2016)
ERF11_col_b 		0.683 0.766
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.683 0.702
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.683 0.702
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.683 0.702
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.677 0.745
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.677 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P06170_001 AP2 20 71

Links

Other AP2 family TFs
Other Musa acuminata TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.797
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.789
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.786
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.781
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.780
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.778
Cla005423 Citrullus lanatus Cla005423 I 0.765
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.765
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.765
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.761
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.761
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.760
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.760
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.760
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.759
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.759
mgf016282m Mimulus guttatus mgf016282m I 0.759
MDP0000839828 Malus domestica MDP0000839828 I 0.759
Pm014953 Prunus mume Pm014953 I 0.759
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.758
mgf007166m Mimulus guttatus mgf007166m I 0.758
PK25211.1 Cannabis sativa PK25211.1 I 0.758
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.757
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.756
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.756
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.756
MDP0000542633 Malus domestica MDP0000542633 I 0.755
MDP0000629527 Malus domestica MDP0000629527 I 0.755
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.755
Pm011907 Prunus mume Pm011907 I 0.755
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.754
Cla003319 Citrullus lanatus Cla003319 I 0.754
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.752
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.750
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.750
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.748
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.747
29640.m000403 Ricinus communis 29640.m000403 I 0.747
Bo6g022410 Brassica oleracea Bo6g022410 I 0.745
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.744
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.741
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.741
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.737
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.735
MDP0000744693 Malus domestica MDP0000744693 I 0.734
MDP0000243113 Malus domestica MDP0000243113 I 0.734
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.729
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.729
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.729
Ca_17824 Cicer arietinum Ca_17824 I 0.723
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.721
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.721
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.721
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.721
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.721
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.720
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.719
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.718
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.717
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.717
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.717
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.717
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.712
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.711
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.710
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.709
ERF3 Arabidopsis thaliana AT1G50640 D 0.709
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.709
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.708
ORGLA08G0225800 Oryza glaberrima ORGLA08G0225800 I 0.708
OMERI08G16840 Oryza meridionalis OMERI08G16840 I 0.708
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.708
BGIOSGA029071 Oryza indica BGIOSGA029071 I 0.708
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.706
Sb07g025843 Sorghum bicolor Sb07g025843 I 0.706
MLOC_10878 Hordeum vulgare MLOC_10878 I 0.705
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.705
TCM_030804 Theobroma cacao TCM_030804 I 0.705
OPUNC02G31100 Oryza punctata OPUNC02G31100 I 0.704
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.703
Pavir.J28880 Panicum virgatum Pavir.J28880 I 0.703
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.703
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.702
LPERR02G27530 Leersia perrieri LPERR02G27530 I 0.702
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.702
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.701
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.699
SELMODRAFT_131245 Selaginella moellendorffii SELMODRAFT_131245 I 0.699
SELMODRAFT_28277 Selaginella moellendorffii SELMODRAFT_28277 I 0.699
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.699
Pavir.J03216 Panicum virgatum Pavir.J03216 I 0.697
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.697
Bra018864 Brassica rapa Bra018864 I 0.696
BGIOSGA036561 Oryza indica BGIOSGA036561 I 0.696
OGLUM12G04880 Oryza glumaepatula OGLUM12G04880 I 0.696
ORUFI12G04720 Oryza rufipogon ORUFI12G04720 I 0.696
ONIVA12G03810 Oryza nivara ONIVA12G03810 I 0.696
OPUNC12G04190 Oryza punctata OPUNC12G04190 I 0.696
OBART12G04120 Oryza barthii OBART12G04120 I 0.696
BGIOSGA005557 Oryza indica BGIOSGA005557 I 0.695
OGLUM02G34120 Oryza glumaepatula OGLUM02G34120 I 0.695
OMERI02G32080 Oryza meridionalis OMERI02G32080 I 0.695
ONIVA02G33420 Oryza nivara ONIVA02G33420 I 0.695
OBART02G33690 Oryza barthii OBART02G33690 I 0.695
Pavir.J32690 Panicum virgatum Pavir.J32690 I 0.695
ORGLA02G0291300 Oryza glaberrima ORGLA02G0291300 I 0.695
Cla013723 Citrullus lanatus Cla013723 I 0.694
Gorai.003G048800 Gossypium raimondii Gorai.003G048800 I 0.694
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.694
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.694
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.694
Solyc04g012050.2 Solanum lycopersicum Solyc04g012050.2 I 0.694
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.694
MTR_5g085070 Medicago truncatula MTR_5g085070 I 0.694
PGSC0003DMG400023593 Solanum tuberosum PGSC0003DMG400023593 I 0.694
MDP0000457509 Malus domestica MDP0000457509 I 0.693
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.693
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.693
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.693
Si013986m.g Setaria italica Si013986m.g I 0.692
OPUNC08G19980 Oryza punctata OPUNC08G19980 I 0.692
BRADI3G41543 Brachypodium distachyon BRADI3G41543 I 0.692
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.691
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.690
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.690
Si018144m.g Setaria italica Si018144m.g I 0.689
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.688
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.688
LPERR08G14810 Leersia perrieri LPERR08G14810 I 0.688
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.687
ERF7 Arabidopsis thaliana AT3G20310 D 0.687
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.686
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.686
SELMODRAFT_73177 Selaginella moellendorffii SELMODRAFT_73177 I 0.685
OS02G0764700 Oryza sativa OS02G0764700 I 0.685
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.685
SELMODRAFT_73174 Selaginella moellendorffii SELMODRAFT_73174 I 0.685
Thhalv10022200m.g Eutrema salsugineum Thhalv10022200m.g I 0.685
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.685
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.685
30174.m008759 Ricinus communis 30174.m008759 I 0.685
OPUNC02G17880 Oryza punctata OPUNC02G17880 I 0.684
PK23186.1 Cannabis sativa PK23186.1 I 0.684
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.684
ORGLA02G0170800 Oryza glaberrima ORGLA02G0170800 I 0.684
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.684
OBART02G19930 Oryza barthii OBART02G19930 I 0.684
ORUFI02G21030 Oryza rufipogon ORUFI02G21030 I 0.684
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.684
OS02G0546600 Oryza sativa OS02G0546600 I 0.684
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I 0.684
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.683
Bra037630 Brassica rapa Bra037630 I 0.683
MDP0000236605 Malus domestica MDP0000236605 I 0.683
ERF13 Arabidopsis thaliana AT2G44840 D 0.683
Bo4g195220 Brassica oleracea Bo4g195220 I 0.683
Bo4g024140 Brassica oleracea Bo4g024140 I 0.683
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.683
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.683
MDP0000310904 Malus domestica MDP0000310904 I 0.683
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.683
Bra004873 Brassica rapa Bra004873 I 0.683
chr4.CM0227.40.nd Lotus japonicus chr4.CM0227.40.nd I 0.683
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.683
ERF11 Arabidopsis thaliana AT1G28370 D 0.683
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.683
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.682
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.682
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.682
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.682
SapurV1A.0007s0970 Salix purpurea SapurV1A.0007s0970 I 0.682
TCM_005706 Theobroma cacao TCM_005706 I 0.682
30174.m008755 Ricinus communis 30174.m008755 I 0.681
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.680
Gorai.001G252400 Gossypium raimondii Gorai.001G252400 I 0.680
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.680
orange1.1g020801m.g Citrus sinensis orange1.1g020801m.g I 0.680
ORUFI02G21040 Oryza rufipogon ORUFI02G21040 I 0.680
Ciclev10026052m.g Citrus clementina Ciclev10026052m.g I 0.680
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.680
Pm017696 Prunus mume Pm017696 I 0.679
OGLUM02G20200 Oryza glumaepatula OGLUM02G20200 I 0.679
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.679
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.679
30174.m008756 Ricinus communis 30174.m008756 I 0.679
Bo7g040820 Brassica oleracea Bo7g040820 I 0.678
GRMZM2G175525 Zea mays GRMZM2G175525 I 0.678
Bra014924 Brassica rapa Bra014924 I 0.678
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.678
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.678
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.678
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.677
Cla016262 Citrullus lanatus Cla016262 I 0.677
A4F248_TOBAC Nicotiana tabacum A4F248_TOBAC D 0.677
A4F249_TOBAC Nicotiana tabacum A4F249_TOBAC D 0.677
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.677
GLYMA07G33511 Glycine max GLYMA07G33511 I 0.677
Cucsa.219890 Cucumis sativus Cucsa.219890 I 0.677
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.677